RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SEPHS2Q99611 448 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 MAN2C1Q9NTJ4 1040 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 MYEF2Q9P2K5 600 aaKnown RBP15.84■□□□□ 0.13
PSPC1-202ENST00000427943 SLC7A8Q9UHI5 535 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 HIF3AQ9Y2N7 669 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 AP3M1Q9Y2T2 418 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 CUBNO60494 3623 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 M0R233 179 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 SYNGR3O43761 229 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 STAMBPO95630 424 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 IFNW1P05000 195 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 FAM157BP0CG42 384 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 MAKP20794 623 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 CDAP32320 146 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 IFNA8P32881 189 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 ALDH3B1P43353 468 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 GSK3BP49841 420 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 RPS23P62266 143 aaKnown RBP15.83■□□□□ 0.12
PSPC1-202ENST00000427943 CD47Q08722 323 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 SLC36A2Q495M3 483 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 ALG10Q5BKT4 473 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 C8orf82Q6P1X6 216 aaPredicted RBP15.83■□□□□ 0.12
PSPC1-202ENST00000427943 OFCC1Q8IZS5 231 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 PAQR4Q8N4S7 273 aaPredicted RBP15.83■□□□□ 0.12
PSPC1-202ENST00000427943 SLC30A7Q8NEW0 376 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 HSH2DQ96JZ2 352 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 FNDC11Q9BVV2 318 aa15.83■□□□□ 0.12
PSPC1-202ENST00000427943 FBN1P35555 2871 aaKnown RBP15.83■□□□□ 0.12
PSPC1-202ENST00000427943 TRAV27A0A087WT01 109 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 IGKV1D-43A0A0B4J1Z2 117 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 CENPBD1B2RD01 187 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 LYNX1G3V0Z9 82 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 FFAR1O14842 300 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 SERPINA1P01009 418 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 LYNX1P0DP58 116 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 SAGP10523 405 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-202ENST00000427943 NCK1P16333 377 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 TCN1P20061 433 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-202ENST00000427943 GZMKP49863 264 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 SEC24CP53992 1094 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 IFI44LQ53G44 452 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 C10orf128Q5T292 105 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 NRMQ8IXM6 262 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 RBM15BQ8NDT2 890 aaKnown RBP15.82■□□□□ 0.12
PSPC1-202ENST00000427943 UBASH3BQ8TF42 649 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 GEMIN6Q8WXD5 167 aaKnown RBP15.82■□□□□ 0.12
PSPC1-202ENST00000427943 NSMAFQ92636 917 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 ELAC2Q9BQ52 826 aaKnown RBP15.82■□□□□ 0.12
PSPC1-202ENST00000427943 TXNIPQ9H3M7 391 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 CHODLQ9H9P2 273 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 EFCAB1Q9HAE3 211 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 CDH20Q9HBT6 801 aa15.82■□□□□ 0.12
PSPC1-202ENST00000427943 A0A1W2PPW3 197 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 LRP5LA4QPB2 252 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 NPIPB13A6NJU9 1138 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 NPIPB4C9JG80 1138 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ZNF23P17027 643 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 EVX1P49640 407 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ZNF133P52736 654 aaPredicted RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ERVS71-1P61550 626 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ATRQ13535 2644 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 TRAM2Q15035 370 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ALKBH6Q3KRA9 238 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 FKBP9P1Q75LS8 142 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 CBLL1Q75N03 491 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 DPPA2Q7Z7J5 298 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ZNF786Q8N393 782 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 CLDN22Q8N7P3 220 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 ARIH2OSQ8N7S6 290 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 OR13C2Q8NGS9 318 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 OR51A7Q8NH64 312 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 FAM162AQ96A26 154 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 NMD3Q96D46 503 aaKnown RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 MSI2Q96DH6 328 aaKnown RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 HOPXQ9BPY8 73 aaPredicted RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 KCTD14Q9BQ13 255 aaPredicted RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 SOX7Q9BT81 388 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 FAM107BQ9H098 131 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 STX18Q9P2W9 335 aaKnown RBP15.81■□□□□ 0.12
PSPC1-202ENST00000427943 REV1Q9UBZ9 1251 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 DUSP13Q9UII6 198 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 CDC42EP3Q9UKI2 254 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 UGT2A1Q9Y4X1 527 aa15.81■□□□□ 0.12
PSPC1-202ENST00000427943 LOC100289279A0A1B0GTE1 492 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 LMX1BO60663 402 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 MMP7P09237 267 aaPredicted RBP15.8■□□□□ 0.12
PSPC1-202ENST00000427943 IGFBP5P24593 272 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 GIFP27352 417 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 CTXN1P60606 82 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 RPL27P61353 136 aaKnown RBP15.8■□□□□ 0.12
PSPC1-202ENST00000427943 MRPS34P82930 218 aaKnown RBP15.8■□□□□ 0.12
PSPC1-202ENST00000427943 TBC1D28Q2M2D7 210 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 NRN1LQ496H8 165 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 RGS7BPQ6MZT1 257 aaPredicted RBP15.8■□□□□ 0.12
PSPC1-202ENST00000427943 HACD2Q6Y1H2 254 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 IL17RELQ6ZVW7 336 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 ICA1LQ8NDH6 482 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 ZNF540Q8NDQ6 660 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 NABP1Q96AH0 204 aa15.8■□□□□ 0.12
PSPC1-202ENST00000427943 CCNB1IP1Q9NPC3 277 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms