RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TSPAN19P0C672 248 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 NR2C1P13056 603 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 PLP2Q04941 152 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 FXNQ16595 210 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 ALG10Q5BKT4 473 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 FKBP9P1Q75LS8 142 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 VTCN1Q7Z7D3 282 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 LRRC18Q8N456 261 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 UBASH3BQ8TF42 649 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 SEPHS2Q99611 448 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 MDFIQ99750 246 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 BEX2Q9BXY8 128 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 TXNIPQ9H3M7 391 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 CDH20Q9HBT6 801 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 RHCGQ9UBD6 479 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 DUSP13Q9UII6 198 aa21.51■■□□□ 1.03
HLA-C-204ENST00000415537 IGHV4-61A0A0C4DH41 118 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 IQCMA0A1B0GVH7 501 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 LMX1BO60663 402 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 SAGP10523 405 aaPredicted RBP21.5■■□□□ 1.03
HLA-C-204ENST00000415537 SLC7A2P52569 658 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 CD47Q08722 323 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 TRAM2Q15035 370 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 TAF11Q15544 211 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 MSMPQ1L6U9 139 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 TBC1D28Q2M2D7 210 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 ARMC4Q5T2S8 1044 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 FAM166AQ6J272 317 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 ZNF786Q8N393 782 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 RBM15BQ8NDT2 890 aaKnown RBP21.5■■□□□ 1.03
HLA-C-204ENST00000415537 OR1J2Q8NGS2 313 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 GEMIN6Q8WXD5 167 aaKnown RBP21.5■■□□□ 1.03
HLA-C-204ENST00000415537 LRMDAQ9H2I8 198 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 GMPR2Q9P2T1 348 aaKnown RBP21.5■■□□□ 1.03
HLA-C-204ENST00000415537 KCNS2Q9ULS6 477 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 FZR1Q9UM11 496 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 HIF3AQ9Y2N7 669 aa21.5■■□□□ 1.03
HLA-C-204ENST00000415537 RTTNQ86VV8 2226 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 LOC100289279A0A1B0GTE1 492 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 NPIPB13A6NJU9 1138 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 NPIPB4C9JG80 1138 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 NME4O00746 187 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 NDUFAB1O14561 156 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 ZNF23P17027 643 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 NUDT2P50583 147 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 TOP3AQ13472 1001 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-204ENST00000415537 IFI44LQ53G44 452 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 C10orf128Q5T292 105 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 RGS7BPQ6MZT1 257 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-204ENST00000415537 CBLL1Q75N03 491 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 OFCC1Q8IZS5 231 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 SHARPINQ9H0F6 387 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 LPAR3Q9UBY5 353 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 SNX13Q9Y5W8 968 aa21.49■■□□□ 1.03
HLA-C-204ENST00000415537 GMNCA6NCL1 334 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 J3KTA2 159 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 SLC2A10O95528 541 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 IGFBP1P08833 259 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-204ENST00000415537 FAM157BP0CG42 384 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 CCL2P13500 99 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 GIFP27352 417 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 ALDH3B1P43353 468 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 ZNF133P52736 654 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-204ENST00000415537 SELENOVP59797 346 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 HSF2Q03933 536 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 LRP11Q86VZ4 500 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 NRMQ8IXM6 262 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 HDAC2Q92769 488 aaKnown RBP21.48■■□□□ 1.03
HLA-C-204ENST00000415537 RBP7Q96R05 134 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 SIAEQ9HAT2 523 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 SMURF2Q9HAU4 748 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 CCNB1IP1Q9NPC3 277 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 MALRD1Q5VYJ5 2156 aa21.48■■□□□ 1.03
HLA-C-204ENST00000415537 A0A1W2PPW3 197 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 SERPINA1P01009 418 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 FAM157CP0CG43 387 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 TCN1P20061 433 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 APLNRP35414 380 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 GSK3BP49841 420 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 CHN2P52757 468 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 CTXN1P60606 82 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 RPL27P61353 136 aaKnown RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 HACD2Q6Y1H2 254 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 RRM2BQ7LG56 351 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 OAFQ86UD1 273 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 RNF113BQ8IZP6 322 aaKnown RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 FNDC8Q8TC99 324 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 NSMAFQ92636 917 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 FAM162AQ96A26 154 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 MSI2Q96DH6 328 aaKnown RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 CMTM5Q96DZ9 223 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 KCTD14Q9BQ13 255 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 ELAC2Q9BQ52 826 aaKnown RBP21.47■■□□□ 1.03
HLA-C-204ENST00000415537 GPR160Q9UJ42 338 aa21.47■■□□□ 1.03
HLA-C-204ENST00000415537 LCKP06239 509 aa21.46■■□□□ 1.03
HLA-C-204ENST00000415537 MAKP20794 623 aa21.46■■□□□ 1.03
HLA-C-204ENST00000415537 CDAP32320 146 aa21.46■■□□□ 1.03
HLA-C-204ENST00000415537 GUCA1AP43080 201 aaPredicted RBP21.46■■□□□ 1.03
HLA-C-204ENST00000415537 RAD52P43351 418 aa21.46■■□□□ 1.03
HLA-C-204ENST00000415537 SEC24CP53992 1094 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms