RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 SYT14Q8NB59 555 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 ZNF837Q96EG3 531 aaPredicted RBP11.71□□□□□ -0.53
CNN3-203ENST00000415017 PLEKHA8Q96JA3 519 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
CNN3-203ENST00000415017 TSSK2Q96PF2 358 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 RBP7Q96R05 134 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 MED20Q9H944 212 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 GPR35Q9HC97 309 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 RPRD1BQ9NQG5 326 aaKnown RBP11.71□□□□□ -0.53
CNN3-203ENST00000415017 ASB6Q9NWX5 421 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 AASSQ9UDR5 926 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 PRSS50Q9UI38 385 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 MOKQ9UQ07 419 aa11.71□□□□□ -0.53
CNN3-203ENST00000415017 HCFC1P51610 2035 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 USP9XQ93008 2570 aaPredicted RBP11.7□□□□□ -0.54
CNN3-203ENST00000415017 CCL21O00585 134 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 MSTNO14793 375 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 DHHO43323 396 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 ENTPD6O75354 484 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 GLCEO94923 617 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 GAAP10253 952 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 CLUP10909 449 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 COX5AP20674 150 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 PAICSP22234 425 aaKnown RBP11.7□□□□□ -0.54
CNN3-203ENST00000415017 PER3P56645 1201 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 ETFDHQ16134 617 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 PCK2Q16822 640 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 NRN1LQ496H8 165 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 MEPCEQ7L2J0 689 aaKnown RBP11.7□□□□□ -0.54
CNN3-203ENST00000415017 ATCAYQ86WG3 371 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 OR2T4Q8NH00 348 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 RND1Q92730 232 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 NABP1Q96AH0 204 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 TEAD3Q99594 435 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 Q9H521 79 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 RASSF1Q9NS23 344 aa11.7□□□□□ -0.54
CNN3-203ENST00000415017 TRIM64A6NGJ6 449 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 A8MXE2 369 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 J3QRE1 110 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 M0R3G1 203 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 SLC16A7O60669 478 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 KHDRBS3O75525 346 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 HRGP04196 525 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 HTR1FP30939 366 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 BLVRAP53004 296 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 FOXG1P55316 489 aaPredicted RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 SIRPAP78324 504 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 MRPS34P82930 218 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 IL5RAQ01344 420 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 DBPQ10586 325 aaPredicted RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 MED21Q13503 144 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 SMN1Q16637 294 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 MTFR2Q6P444 385 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 DNM1P34Q6PK57 102 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 MRGPRGQ86SM5 289 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 GID4Q8IVV7 300 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 ZNF100Q8IYN0 542 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 GPR137CQ8N3F9 429 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 CNEP1R1Q8N9A8 125 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 ZNF610Q8N9Z0 462 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 RELL2Q8NC24 303 aaPredicted RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 SLC26A10Q8NG04 563 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 OR9Q1Q8NGQ5 310 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 OR6N1Q8NGY5 312 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 CNIH3Q8TBE1 160 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 CCDC120Q96HB5 630 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 Q96MT0 163 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 NELFAQ9H3P2 528 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 C12orf49Q9H741 205 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 CRLF2Q9HC73 371 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 FKBP14Q9NWM8 211 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 WARS2Q9UGM6 360 aaKnown RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 SH3BGRL2Q9UJC5 107 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 PROCRQ9UNN8 238 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 COA3Q9Y2R0 106 aaPredicted RBP11.69□□□□□ -0.54
CNN3-203ENST00000415017 CACNA1CQ13936 2221 aa11.69□□□□□ -0.54
CNN3-203ENST00000415017 SLC22A31A6NKX4 558 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
CNN3-203ENST00000415017 LRRTM2O43300 516 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 TFP02787 698 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 SCG5P05408 212 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 GYPBP06028 91 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 ITGA5P08648 1049 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 AGAP20933 346 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 LAP3P28838 519 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 MPGP29372 298 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 CSNK2BP67870 215 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 ROR2Q01974 943 aaKnown RBP11.68□□□□□ -0.54
CNN3-203ENST00000415017 HSF2Q03933 536 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 APOFQ13790 326 aa11.68□□□□□ -0.54
CNN3-203ENST00000415017 P2RY6Q15077 328 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms