RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ZBED5Q49AG3 693 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 IQCCQ4KMZ1 466 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 NUP37Q8NFH4 326 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 OR4K5Q8NGD3 323 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 TSPAN32Q96QS1 320 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 DENND2DQ9H6A0 471 aaPredicted RBP12.83□□□□□ -0.36
LIMS4-201ENST00000413601 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
LIMS4-201ENST00000413601 TMEM5Q9Y2B1 443 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
LIMS4-201ENST00000413601 YLPM1P49750 1951 aaKnown RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 IGKV1D-43A0A0B4J1Z2 117 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 H7C417 338 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ENTPD5O75356 428 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 FARS2O95363 451 aaKnown RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 OR4A8P0C604 315 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 T-ENOLP0DO92 83 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 BMP4P12644 408 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF35P13682 527 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF26P17031 533 aaPredicted RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 CDAP32320 146 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 RPL4P36578 427 aaKnown RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 NUDT6P53370 316 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ERVK-25P63136 954 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 DAG1Q14118 895 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 KRT80Q6KB66 452 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 CYP2R1Q6VVX0 501 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 LRRC18Q8N456 261 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF519Q8TB69 540 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 NSMAFQ92636 917 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 MCUR1Q96AQ8 359 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 NMD3Q96D46 503 aaKnown RBP12.82□□□□□ -0.36
LIMS4-201ENST00000413601 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 FUZQ9BT04 418 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 RNF121Q9H920 327 aa12.82□□□□□ -0.36
LIMS4-201ENST00000413601 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 PDE5AO76074 875 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 GADD45GO95257 159 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 LY6G6DO95868 133 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 CALB2P22676 271 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 NR4A1P22736 598 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 OMPP47874 163 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SPIBQ01892 262 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SNTB2Q13425 540 aaKnown RBP12.81□□□□□ -0.36
LIMS4-201ENST00000413601 TMEM53Q6P2H8 277 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SLC25A47Q6Q0C1 308 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 CLEC9AQ6UXN8 241 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 DNM1P46Q6ZS02 220 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SLC16A14Q7RTX9 510 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF584Q8IVC4 421 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 RBP7Q96R05 134 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 ALG12Q9BV10 488 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 ZNF442Q9H7R0 627 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 GRHPRQ9UBQ7 328 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 ADAM18Q9Y3Q7 739 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 UGT2A1Q9Y4X1 527 aa12.81□□□□□ -0.36
LIMS4-201ENST00000413601 SH3PXD2BA1X283 911 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 A6NIZ1 184 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 B9A039 149 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 H7C1C5 153 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 PTP4A3O75365 173 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 LY6HO94772 140 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SERPINA5P05154 406 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 FABP3P05413 133 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 CD14P08571 375 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 NR2C1P13056 603 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 NPR2P20594 1047 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 ATP6V1B2P21281 511 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 LIMS1P48059 325 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 RAP1BP61224 184 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SNRPD2P62316 118 aaKnown RBP12.8□□□□□ -0.36
LIMS4-201ENST00000413601 LCN6P62502 163 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 RAP1AP62834 184 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
LIMS4-201ENST00000413601 EFNB3Q15768 340 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SGCAQ16586 387 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 THEM4Q5T1C6 240 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 FAM205BPQ63HN1 556 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 ARIH2OSQ8N7S6 290 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 MAPK1IP1LQ8NDC0 245 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 NABP1Q96AH0 204 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 Q96M85 177 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 REG4Q9BYZ8 158 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SIAEQ9HAT2 523 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 IL1RAPQ9NPH3 570 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 ACTR3BQ9P1U1 418 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 FBXL3Q9UKT7 428 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 AURKCQ9UQB9 309 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 SIGLEC7Q9Y286 467 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 RTTNQ86VV8 2226 aa12.8□□□□□ -0.36
LIMS4-201ENST00000413601 UNC119BA6NIH7 251 aa12.79□□□□□ -0.36
LIMS4-201ENST00000413601 VSTM5A8MXK1 200 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms