RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PIPP12273 146 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 CD59P13987 128 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 C8orf82Q6P1X6 216 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF529Q6P280 563 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 MEX3DQ86XN8 651 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 CCDC28AQ8IWP9 274 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 GDPD1Q8N9F7 314 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 POGLUT1Q8NBL1 392 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 TERB2Q8NHR7 220 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 TMEM43Q9BTV4 400 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 EGLN3Q9H6Z9 239 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 DCAF16Q9NXF7 216 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 PCDHGA9Q9Y5G4 932 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 REV3LO60673 3130 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF816-ZNF321PA0A0X1KG74 233 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 OR5H15A6NDH6 313 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 DISC1C4P0D8 188 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 FADS1O60427 444 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ISL1P61371 349 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 EMC4Q5J8M3 183 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 LIPKQ5VXJ0 399 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SLX4IPQ5VYV7 408 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 LRFN4Q6PJG9 635 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 LRRN1Q6UXK5 716 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SLC35F2Q8IXU6 374 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 MAML2Q8IZL2 1156 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ASB17Q8WXJ9 295 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SGCDQ92629 289 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ZMYND19Q96E35 227 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 TSNAXQ99598 290 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SAMD10Q9BYL1 202 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 NGBQ9NPG2 151 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 LANCL2Q9NS86 450 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 NDRG4Q9ULP0 352 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 C12orf71A8MTZ7 269 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 ITGB2P05107 769 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 RAB3BP20337 219 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 AZGP1P25311 298 aaKnown RBP7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SERPINF1P36955 418 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 CHAF1BQ13112 559 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 MELKQ14680 651 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 KIRREL2Q6UWL6 708 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 PRICKLE2Q7Z3G6 844 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 KCTD20Q7Z5Y7 419 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 BEST3Q8N1M1 668 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 GGHQ92820 318 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 UBQLN3Q9H347 655 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 GFOD1Q9NXC2 390 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SPTBP11277 2137 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SNCGO76070 127 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 APOC3P02656 99 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 SRD5A2P31213 254 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 HEPHL1Q6MZM0 1159 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 LIX1LQ8IVB5 337 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 EXD3Q8N9H8 876 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 OR51L1Q8NGJ5 315 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 POTEKPQ9BYX7 375 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 DEFB127Q9H1M4 99 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 OSGIN1Q9UJX0 560 aa7.75□□□□□ -1.17
SYNE1-211ENST00000413186 M0R082 166 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 NTN3O00634 580 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 GABARAPO95166 117 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ERCC1P07992 297 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PVALBP20472 110 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 CNR1P21554 472 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 HSF1Q00613 529 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 FOXK2Q01167 660 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 HNRNPA0Q13151 305 aaKnown RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 SEC23BQ15437 767 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ARSKQ6UWY0 536 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF517Q6ZMY9 492 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF454Q8N9F8 522 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF417Q8TAU3 575 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 DTD1Q8TEA8 209 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF587Q96SQ5 575 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 SLC26A1Q9H2B4 701 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 DPAGT1Q9H3H5 408 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 A0A087WUJ7 227 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 TRBV2A0A0J9YWF9 115 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 TPPPO94811 219 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 IL1AP01583 271 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 SFTPCP11686 197 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 RPL27P61353 136 aaKnown RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 IGLV3-21P80748 117 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PRKCDQ05655 676 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZFP36L1Q07352 338 aaKnown RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 NXNL2Q5VZ03 156 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 WDSUB1Q8N9V3 476 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 CA5BP1Q8WTZ4 195 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 MUCL1Q96DR8 90 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 FAIMQ9NVQ4 179 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PLA2G3Q9NZ20 509 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 BOLA2-SMG1P6H3BVE0 249 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF208O43345 1280 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ATE1O95260 518 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 APLNRP35414 380 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 CD97P48960 835 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 TSPAN5P62079 268 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms