RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 RANBP3Q9H6Z4 567 aaPredicted RBP0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 MCCC2Q9HCC0 563 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 VAT1LQ9HCJ6 419 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 C8orf17Q9NRJ1 99 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 DDX19AQ9NUU7 478 aaKnown RBP0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 UVRAGQ9P2Y5 699 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 LAMP5Q9UJQ1 280 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 CBY1Q9Y3M2 126 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 IKBKGQ9Y6K9 419 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 R4GN34 69 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 STRCP1A6NGW2 1772 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 DOCK10Q96BY6 2186 aa0.13□□□□□ -2.39
RNU2-55P-201ENST00000411146 DENND4AQ7Z401 1863 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 COL4A1P02462 1669 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 IGLV10-54A0A075B6I4 117 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 CCER2I3L3R5 266 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ATP5LO75964 103 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 HEXBP07686 556 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 DRD5P21918 477 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 HMGB2P26583 209 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RDXP35241 583 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 HRH1P35367 487 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 MAS1LP35410 378 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 QARSP47897 775 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 SUB1P53999 127 aaKnown RBP eCLIP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 NAPAP54920 295 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 PPP1CBP62140 327 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ARF5P84085 180 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 HSF2Q03933 536 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 FMODQ06828 376 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 FAM133BQ5BKY9 247 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RNASE13Q5GAN3 156 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 TTC19Q6DKK2 380 aaPredicted RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 CCDC91Q7Z6B0 441 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ECHDC2Q86YB7 292 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 MISPQ8IVT2 679 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 CDKL3Q8IVW4 592 aaPredicted RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 PUSL1Q8N0Z8 303 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 SLC35G3Q8N808 338 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 HSD17B11Q8NBQ5 300 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 STXBP6Q8NFX7 210 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 OR2L3Q8NG85 312 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 OR4S2Q8NH73 311 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 OR1F12Q8NHA8 337 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 MUC7Q8TAX7 377 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 N4BP2L2Q92802 583 aaPredicted RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 DUS3LQ96G46 650 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF607Q96SK3 696 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RUFY1Q96T51 708 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ATP6V0BQ99437 205 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RIT2Q99578 217 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RARRES2Q99969 163 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 FAIM2Q9BWQ8 316 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 SLC25A2Q9BXI2 301 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 DPH5Q9H2P9 285 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 RPF2Q9H7B2 306 aaKnown RBP0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 ADAP2Q9NPF8 381 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 PARP11Q9NR21 331 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 TMOD2Q9NZR1 351 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 MGAT4BQ9UQ53 548 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 NCAPD2Q15021 1401 aa0.12□□□□□ -2.39
RNU2-55P-201ENST00000411146 FAM47DPA6NHR8 397 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 CEACAM18A8MTB9 384 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 NPIPA7E9PJI5 369 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 F5H6K3 240 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 CLDN5O00501 218 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 CHADO15335 359 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 UPK3AO75631 287 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 PFN1P07737 140 aaKnown RBP0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 NPIPA8P0DM63 369 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 INAFM2P0DMQ5 153 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 AK4P27144 223 aaPredicted RBP0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 RORCP51449 518 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 TAS2R31P59538 309 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 OR5I1Q13606 314 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 RCAN2Q14206 197 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 SLC9A3R2Q15599 337 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 ZNF181Q2M3W8 571 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 PYDC2Q56P42 97 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 C1orf220Q5T0J3 134 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 PYHIN1Q6K0P9 492 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 TBPL2Q6SJ96 375 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 SYT10Q6XYQ8 523 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 ABHD13Q7L211 337 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 MOB3BQ86TA1 216 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 PLA2G4DQ86XP0 818 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 SGPP2Q8IWX5 399 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 TMEM256Q8N2U0 113 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 CLDN19Q8N6F1 224 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 LRRC75AQ8NAA5 344 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 FNDC5Q8NAU1 212 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 PIFOQ8TCI5 191 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 SLC13A3Q8WWT9 602 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 C4orf36Q96KX1 117 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 TGM7Q96PF1 710 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 NPY6RQ99463 290 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 TBL1YQ9BQ87 522 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 ACAT2Q9BWD1 397 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 OSBPL10Q9BXB5 764 aa0.11□□□□□ -2.39
RNU2-55P-201ENST00000411146 RAB34Q9BZG1 259 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms