RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TMEM53Q6P2H8 277 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 HACD2Q6Y1H2 254 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 FKBP9P1Q75LS8 142 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 CBLL1Q75N03 491 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 SLC16A14Q7RTX9 510 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 VTCN1Q7Z7D3 282 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 TREML1Q86YW5 311 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF584Q8IVC4 421 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 CDK20Q8IZL9 346 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 OFCC1Q8IZS5 231 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF540Q8NDQ6 660 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 FGFBP3Q8TAT2 258 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 CMTM5Q96DZ9 223 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 FOXN4Q96NZ1 517 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 ELAC2Q9BQ52 826 aaKnown RBP11.56□□□□□ -0.56
VCX3A-202ENST00000398729 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
VCX3A-202ENST00000398729 SLC7A8Q9UHI5 535 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 HIF3AQ9Y2N7 669 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 SYNGR3O43761 229 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 PTHP01270 115 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 ADRA2AP08913 450 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 SAGP10523 405 aaPredicted RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 DAOP14920 347 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 GSK3BP49841 420 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 GZMKP49863 264 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF133P52736 654 aaPredicted RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 PLP2Q04941 152 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 CD47Q08722 323 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 TAF11Q15544 211 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 FXNQ16595 210 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 KRTAP24-1Q3LI83 254 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 CHRFAM7AQ494W8 412 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 C10orf128Q5T292 105 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 ARMC4Q5T2S8 1044 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 RNF113BQ8IZP6 322 aaKnown RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 ZCCHC24Q8N2G6 241 aaKnown RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 SLC30A7Q8NEW0 376 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 FAM162AQ96A26 154 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 KCTD14Q9BQ13 255 aaPredicted RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 MRPL37Q9BZE1 423 aaKnown RBP11.55□□□□□ -0.56
VCX3A-202ENST00000398729 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 TXNIPQ9H3M7 391 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 MS4A5Q9H3V2 200 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 C1orf198Q9H425 327 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 SMURF2Q9HAU4 748 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 CDH20Q9HBT6 801 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 RHCGQ9UBD6 479 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 SNX13Q9Y5W8 968 aa11.55□□□□□ -0.56
VCX3A-202ENST00000398729 IQCMA0A1B0GVH7 501 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 SLC22A23A1A5C7 686 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 GMNCA6NCL1 334 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 J3KTA2 159 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 M0R233 179 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 STAMBPO95630 424 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 SERPINA1P01009 418 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 SEC24CP53992 1094 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 PRKCDQ05655 676 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 TOP3AQ13472 1001 aaPredicted RBP11.54□□□□□ -0.56
VCX3A-202ENST00000398729 MSMPQ1L6U9 139 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 TBC1D28Q2M2D7 210 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 ANKDD1AQ495B1 522 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF730Q6ZMV8 503 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 NRMQ8IXM6 262 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 LRRC18Q8N456 261 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 RBM15BQ8NDT2 890 aaKnown RBP11.54□□□□□ -0.56
VCX3A-202ENST00000398729 OR1J2Q8NGS2 313 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 FNDC8Q8TC99 324 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 ACOT11Q8WXI4 607 aaPredicted RBP11.54□□□□□ -0.56
VCX3A-202ENST00000398729 HDAC2Q92769 488 aaKnown RBP11.54□□□□□ -0.56
VCX3A-202ENST00000398729 HSH2DQ96JZ2 352 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 SYT3Q9BQG1 590 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 FAM107BQ9H098 131 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 NSRP1Q9H0G5 558 aaKnown RBP11.54□□□□□ -0.56
VCX3A-202ENST00000398729 MYLK2Q9H1R3 596 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 LRMDAQ9H2I8 198 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 ABCD2Q9UBJ2 740 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 REV1Q9UBZ9 1251 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 TENM1Q9UKZ4 2725 aa11.54□□□□□ -0.56
VCX3A-202ENST00000398729 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 EFCAB9A8MZ26 197 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 FFAR1O14842 300 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 SLC2A10O95528 541 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 IGHMP01871 453 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 IGFBP1P08833 259 aaPredicted RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 FAM157CP0CG43 387 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
VCX3A-202ENST00000398729 MAKP20794 623 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 FUT4P22083 530 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 PRDX6P30041 224 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 SLC9A3P48764 834 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 SELENOVP59797 346 aa11.53□□□□□ -0.56
VCX3A-202ENST00000398729 CTXN1P60606 82 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms