RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PTP4A1Q93096 173 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SARAFQ96BY9 339 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 WDYHV1Q96HA8 205 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SF3B5Q9BWJ5 86 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 PRRG4Q9BZD6 226 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 CCDC90BQ9GZT6 254 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 RPRD1BQ9NQG5 326 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 MED29Q9NX70 200 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SNX5Q9Y5X3 404 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 IRGMA1A4Y4 181 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 PRSS37A4D1T9 235 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 DPPA5A6NC42 116 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SLC22A31A6NKX4 558 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 H7C1C5 153 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 RGS10O43665 173 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 DBTP11182 482 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ATP6V1E1P36543 226 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 MTNR1AP48039 350 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 BIDP55957 195 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 LCN6P62502 163 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SLC35A2P78381 396 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SLC17A1Q14916 467 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 POU4F3Q15319 338 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 KLHL22Q53GT1 634 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 PM20D2Q8IYS1 436 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 STX19Q8N4C7 294 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 OR9Q1Q8NGQ5 310 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 RND1Q92730 232 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 RNFT2Q96EX2 444 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 TXNDC15Q96J42 360 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SNX18Q96RF0 628 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 HCAR1Q9BXC0 346 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 KCNJ16Q9NPI9 418 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 CNOT2Q9NZN8 540 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 WARS2Q9UGM6 360 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 FAM90A27PA6NNH2 459 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 TRAF3IP2O43734 574 aaPredicted RBP11.74□□□□□ -0.53
SEC13-209ENST00000397117 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
SEC13-209ENST00000397117 GYPBP06028 91 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 CLUP10909 449 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 SLC25A1P53007 311 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 CLDN17P56750 224 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 TUBA4AP68366 448 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 ST3GAL4Q11206 333 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 TMED1Q13445 227 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 PON3Q15166 354 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 CREB3L2Q70SY1 520 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 RPRMLQ8N4K4 120 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 SYT14Q8NB59 555 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 PROKR2Q8NFJ6 384 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 OR2T4Q8NH00 348 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 ZPLD1Q8TCW7 415 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 NRGNQ92686 78 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
SEC13-209ENST00000397117 DDOQ99489 341 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 TEAD3Q99594 435 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 FOXC2Q99958 501 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 RHNO1Q9BSD3 238 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 EMC6Q9BV81 110 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 SYT4Q9H2B2 425 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 TP63Q9H3D4 680 aaPredicted RBP11.74□□□□□ -0.53
SEC13-209ENST00000397117 PAK1IP1Q9NWT1 392 aaPredicted RBP11.74□□□□□ -0.53
SEC13-209ENST00000397117 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
SEC13-209ENST00000397117 SLC35F4A4IF30 521 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 AHCYL1O43865 530 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 CYTIPO60759 359 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
SEC13-209ENST00000397117 CLPTM1O96005 669 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 IGHG1P01857 330 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 TFAP2AP05549 437 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 PIPP12273 146 aaPredicted RBP11.73□□□□□ -0.53
SEC13-209ENST00000397117 SPI1P17947 270 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 CLRN1P58418 232 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 PIGFQ07326 219 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 RAB40BQ12829 278 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 SLC35D3Q5M8T2 416 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 ABLIM2Q6H8Q1 611 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 TGIF2LYQ8IUE0 185 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 OR6K6Q8NGW6 343 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 OR6X1Q8NH79 312 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 SGCDQ92629 289 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 SLC25A44Q96H78 314 aaPredicted RBP11.73□□□□□ -0.53
SEC13-209ENST00000397117 NMNAT2Q9BZQ4 307 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 PRDM14Q9GZV8 571 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 RERGLQ9H628 205 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 SRA1Q9HD15 236 aaKnown RBP11.73□□□□□ -0.53
SEC13-209ENST00000397117 VCX3AQ9NNX9 186 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 FKBP14Q9NWM8 211 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 ASB6Q9NWX5 421 aa11.73□□□□□ -0.53
SEC13-209ENST00000397117 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms