RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 HNRNPA0Q13151 305 aaKnown RBP10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 TOMM20Q15388 145 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 FAM83FQ8NEG4 500 aaPredicted RBP10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR14L1PQ8NHC6 308 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 ABHD4Q8TB40 342 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 ASB17Q8WXJ9 295 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 SIGLEC12Q96PQ1 595 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 TPK1Q9H3S4 243 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 SMURF1Q9HCE7 757 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 B3GNT3Q9Y2A9 372 aa10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 COA3Q9Y2R0 106 aaPredicted RBP10.23□□□□□ -0.77
SMARCAL1-203ENST00000392128 MED12Q93074 2177 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 ZNF292O60281 2723 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 TRBV2A0A0J9YWF9 115 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PINLYPA6NC86 204 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 TAF4O00268 1085 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 CASKO14936 926 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 GPRIN2O60269 458 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 KHDRBS3O75525 346 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 UPK3AO75631 287 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 WDPCPO95876 746 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 F10P00742 488 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 KRT8P05787 483 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 CLEC2LP0C7M8 214 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PSKH1P11801 424 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 ZNF43P17038 809 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 EDNRAP25101 427 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 MTNR1BP49286 362 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 SOX8P57073 446 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR1C1Q15619 314 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 GPAT4Q86UL3 456 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 GALNT16Q8N428 558 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 SLC26A10Q8NG04 563 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR2M7Q8NG81 312 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR6X1Q8NH79 312 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 SLC25A44Q96H78 314 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 KCNS3Q9BQ31 491 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PLEKHB1Q9UF11 243 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 KCNG2Q9UJ96 466 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 A0A0J9YW62 118 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 SHISA3A0PJX4 238 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 RAMP1O60894 148 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 VAMP5O95183 116 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 IGHG1P01857 330 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PGA4P0DJD7 388 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PGA3P0DJD8 388 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR8G3PP0DMU2 310 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PSMB10P40306 273 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 ETV6P41212 452 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 RRADP55042 308 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 ADAM8P78325 824 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 FMODQ06828 376 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 POU4F3Q15319 338 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 THEM4Q5T1C6 240 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 SLC18B1Q6NT16 456 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 PAMR1Q6UXH9 720 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 YRDCQ86U90 279 aaKnown RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 YIPF7Q8N8F6 280 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 TEX19Q8NA77 164 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 NOXO1Q8NFA2 376 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 THEM6Q8WUY1 208 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 RBP7Q96R05 134 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 NAA11Q9BSU3 229 aaPredicted RBP10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 EMC6Q9BV81 110 aa10.22□□□□□ -0.77
SMARCAL1-203ENST00000392128 MUC6Q6W4X9 2439 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 PSMD9O00233 223 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 DVL2O14641 736 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 HRGP04196 525 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 GDF1P27539 372 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 CD40LGP29965 261 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 RPS27P42677 84 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 AGFG1P52594 562 aaKnown RBP10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 ZNF45Q02386 682 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 PCK2Q16822 640 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 TEX30Q5JUR7 227 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 ATP1A1-AS1Q5TC04 95 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 LIPNQ5VXI9 398 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 LINC00696Q6ZRV3 163 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 ASB18Q6ZVZ8 466 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 TRILQ7L0X0 811 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 BTLAQ7Z6A9 289 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 FNDC8Q8TC99 324 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 AP3S1Q92572 193 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 FOXN4Q96NZ1 517 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 OR8B4Q96RC9 309 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 TTYH2Q9BSA4 534 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 KLHL9Q9P2J3 617 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 ITGB1BP2Q9UKP3 347 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 IKZF2Q9UKS7 526 aa10.21□□□□□ -0.77
SMARCAL1-203ENST00000392128 IGKV1D-43A0A0B4J1Z2 117 aa10.21□□□□□ -0.78
SMARCAL1-203ENST00000392128 SLC35F4A4IF30 521 aa10.21□□□□□ -0.78
SMARCAL1-203ENST00000392128 LINC01387J3KSC0 135 aa10.21□□□□□ -0.78
SMARCAL1-203ENST00000392128 CTDSP2O14595 271 aa10.21□□□□□ -0.78
SMARCAL1-203ENST00000392128 TNFSF11O14788 317 aa10.21□□□□□ -0.78
SMARCAL1-203ENST00000392128 GATBO75879 557 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms