RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 RGS5O15539 181 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 SLC19A2O60779 497 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 CEACAM1P13688 526 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 MELKQ14680 651 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 RAET1LQ5VY80 246 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 B3GNTL1Q67FW5 361 aaPredicted RBP12.14□□□□□ -0.47
SEC13-203ENST00000383801 GLB1L2Q8IW92 636 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 BEST3Q8N1M1 668 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 RFLNBQ8N5W9 214 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 SYT14Q8NB59 555 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 PRSS33Q8NF86 280 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 SLC26A10Q8NG04 563 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
SEC13-203ENST00000383801 CMTM3Q96MX0 182 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 COMMD4Q9H0A8 199 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.14□□□□□ -0.477e-9■■□□□ 12.4
SEC13-203ENST00000383801 TBCCD1Q9NVR7 557 aa12.14□□□□□ -0.47
SEC13-203ENST00000383801 MRPL22Q9NWU5 206 aaKnown RBP12.14□□□□□ -0.47
SEC13-203ENST00000383801 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 TVP23AA6NH52 213 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 PDCD5O14737 125 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 PSMD7P51665 324 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 ZNF133P52736 654 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 BIDP55957 195 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RPS11P62280 158 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC13-203ENST00000383801 ADAM8P78325 824 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 GABREP78334 506 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 SLC17A1Q14916 467 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 PDSS1Q5T2R2 415 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 XKRXQ6PP77 449 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RPTNQ6XPR3 784 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 ESPNLQ6ZVH7 1005 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 ZNF227Q86WZ6 799 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 KDM8Q8N371 416 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 OR5AK2Q8NH90 309 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RNF128Q8TEB7 428 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 NSMAFQ92636 917 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 COX4I2Q96KJ9 171 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 JSRP1Q96MG2 331 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 ATF6BQ99941 703 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RNF32Q9H0A6 362 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RABL2AQ9UBK7 228 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 B4GALT7Q9UBV7 327 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 IKZF2Q9UKS7 526 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 RABL2BQ9UNT1 228 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 COA3Q9Y2R0 106 aaPredicted RBP12.13□□□□□ -0.47
SEC13-203ENST00000383801 TTC28Q96AY4 2481 aa12.13□□□□□ -0.47
SEC13-203ENST00000383801 KNTC1P50748 2209 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 CLEC2LP0C7M8 214 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 PGA4P0DJD7 388 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 PGA3P0DJD8 388 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 RAB3BP20337 219 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 LAP3P28838 519 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 SHC1P29353 583 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 SFTPDP35247 375 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 CD96P40200 585 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
SEC13-203ENST00000383801 CLRN1P58418 232 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 RIN1Q13671 783 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 KCNMB1Q16558 191 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 Q499Y3 187 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 LYPD4Q6UWN0 246 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 DCDC5Q6ZRR9 648 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 LSRQ86X29 649 aaPredicted RBP12.12□□□□□ -0.47
SEC13-203ENST00000383801 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 NOXO1Q8NFA2 376 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 OR2G2Q8NGZ5 317 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 PNPLA2Q96AD5 504 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 PPP1R14BQ96C90 147 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 MAP6Q96JE9 813 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 UBL7Q96S82 380 aaPredicted RBP12.12□□□□□ -0.47
SEC13-203ENST00000383801 DCLRE1CQ96SD1 692 aaKnown RBP12.12□□□□□ -0.47
SEC13-203ENST00000383801 SP140LQ9H930 580 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 TIGARQ9NQ88 270 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 MED29Q9NX70 200 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
SEC13-203ENST00000383801 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 LRRTM2O43300 516 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 NEURL1O76050 574 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 ZFPL1O95159 310 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 LIPCP11150 499 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 SRMP19623 302 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 ITGA3P26006 1051 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 APEX1P27695 318 aaKnown RBP12.11□□□□□ -0.47
SEC13-203ENST00000383801 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
SEC13-203ENST00000383801 DEFA1P59665 94 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms