RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 GID8Q9NWU2 228 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 AP3M1Q9Y2T2 418 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 SH3GLB1Q9Y371 365 aa11.17□□□□□ -0.62
RPAIN-202ENST00000381208 IQCMA0A1B0GVH7 501 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 BLOC1S5-TXNDC5H3BN57 136 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SNAP29O95721 258 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 QDPRP09417 244 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 FUT1P19526 365 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ACHEP22303 614 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 RAD52P43351 418 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 GYS2P54840 703 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TAF11Q15544 211 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 HIST3H3Q16695 136 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TBC1D28Q2M2D7 210 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 LIPNQ5VXI9 398 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 RGS7BPQ6MZT1 257 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SLC16A14Q7RTX9 510 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 C1orf174Q8IYL3 243 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ZCCHC24Q8N2G6 241 aaKnown RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SLC30A7Q8NEW0 376 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM239Q8WW34 195 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MCHR2Q969V1 340 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SGTBQ96EQ0 304 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 C1orf159Q96HA4 380 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SYT3Q9BQG1 590 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 PRSS27Q9BQR3 290 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF416Q9BWM5 594 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM120AQ9BXJ8 343 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SMURF2Q9HAU4 748 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 INIPQ9NRY2 104 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SLCO1C1Q9NYB5 712 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 A0A1W2PPW3 197 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 LRP5LA4QPB2 252 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 B4DSR2 109 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 FBP2O00757 339 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 OR7A10O76100 309 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TFP02787 698 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MT-ND5P03915 603 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 IGFBP1P08833 259 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ACADSP16219 412 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 GPR6P46095 362 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF133P52736 654 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ARFIP2P53365 341 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 CDH15P55291 814 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 RPL18Q07020 188 aaKnown RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SCGB2A2Q13296 93 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MELKQ14680 651 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 PCGF3Q3KNV8 242 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 C10orf128Q5T292 105 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF584Q8IVC4 421 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ARIH2OSQ8N7S6 290 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 OR4K5Q8NGD3 323 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 ZNF519Q8TB69 540 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SNX33Q8WV41 574 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 C11orf40Q8WZ69 217 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 SNX18Q96RF0 628 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MRPL13Q9BYD1 178 aaKnown RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TPK1Q9H3S4 243 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MEPEQ9NQ76 525 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 DUSP13Q9UII6 198 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 TMEFF2Q9UIK5 374 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-202ENST00000381208 RIMS3Q9UJD0 308 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
RPAIN-202ENST00000381208 MRASO14807 208 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 SLC22A2O15244 555 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 TSPAN19P0C672 248 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ZNF250P15622 560 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 APLNRP35414 380 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 CRYBA2P53672 197 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-202ENST00000381208 UGT2B15P54855 530 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 KLF3P57682 345 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-202ENST00000381208 GUCA2AQ02747 115 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 TEKQ02763 1124 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ST3GAL3Q11203 375 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 KLF10Q13118 480 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ANKDD1AQ495B1 522 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 RABL3Q5HYI8 236 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 FAM209AQ5JX71 171 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ELFN2Q5R3F8 820 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 DEF8Q6ZN54 512 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ARPINQ7Z6K5 226 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 WDFY1Q8IWB7 410 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 RFLNBQ8N5W9 214 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 TEX29Q8N6K0 151 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 RBM15BQ8NDT2 890 aaKnown RBP11.15□□□□□ -0.63
RPAIN-202ENST00000381208 SYNPRQ8TBG9 265 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 ASB10Q8WXI3 467 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 LZICQ8WZA0 190 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 SH3GL3Q99963 347 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 SIAEQ9HAT2 523 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 NKIRAS2Q9NYR9 191 aa11.15□□□□□ -0.63
RPAIN-202ENST00000381208 CUBNO60494 3623 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms