RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LIM2P55344 173 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 AVPI1Q5T686 147 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 OLIG3Q7RTU3 272 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PRSS45Q7RTY3 260 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PCNPQ8WW12 178 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 SMIM19Q96E16 107 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SGCZQ96LD1 299 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PRO3102Q9H379 93 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SDHAF2Q9NX18 166 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SHPKQ9UHJ6 478 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 A0A1B0GUH1 482 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SGCEO43556 437 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SSX4O60224 188 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 CHRM4P08173 479 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 CD38P28907 300 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PPT1P50897 306 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 DGCR2P98153 550 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 LINC00615Q96LM1 132 aaPredicted RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 CDH20Q9HBT6 801 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SMCO4Q9NRQ5 59 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 EMC9Q9Y3B6 208 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 CHST2Q9Y4C5 530 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 MYO15AQ9UKN7 3530 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 DMDP11532 3685 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 SERTM1A2A2V5 107 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TMX2-CTNND1H3BSU7 103 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 H7C1C5 153 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 NUDT21O43809 227 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 ACHEP22303 614 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 BLVRBP30043 206 aaPredicted RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 ZNF93P35789 620 aaPredicted RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 SRP9P49458 86 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 LCN6P62502 163 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 ERV3-1Q14264 604 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 KIAA0040Q15053 153 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 C12orf73Q69YU5 71 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 PAPD4Q6PIY7 484 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 Q7L0L9 218 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 COMTD1Q86VU5 262 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TMEM200AQ86VY9 491 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TMEFF1Q8IYR6 380 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 FOXN4Q96NZ1 517 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 DCBLD2Q96PD2 775 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 TMEM100Q9NV29 134 aa7.7□□□□□ -1.18
VPS36-201ENST00000378060 ZNF638Q14966 1978 aaKnown RBP7.7□□□□□ -1.18
VPS36-201ENST00000378060 RPS10-NUDT3A0A1W2PQS6 291 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 A6NL46 340 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 TSTD3H0UI37 97 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 M0R082 166 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MSTNO14793 375 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 TBX19O60806 448 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 RGS11O94810 467 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ETHE1O95571 254 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MAOBP27338 520 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
VPS36-201ENST00000378060 RFX2P48378 723 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 HMGA2P52926 109 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 COL9A2Q14055 689 aaPredicted RBP7.69□□□□□ -1.18
VPS36-201ENST00000378060 CDK5R1Q15078 307 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MSMO1Q15800 293 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 SOHLH1Q5JUK2 328 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ABHD17BQ5VST6 288 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 FAM57BQ71RH2 274 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 WDR5BQ86VZ2 330 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MSRB3Q8IXL7 192 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 PRSS35Q8N3Z0 413 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 RASD2Q96D21 266 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 SLC6A18Q96N87 628 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 AP1S3Q96PC3 154 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 RHNO1Q9BSD3 238 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 NXF5Q9H1B4 397 aaKnown RBP7.69□□□□□ -1.18
VPS36-201ENST00000378060 OR52A1Q9UKL2 312 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 A0A087WV62 115 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 IFITM5A6NNB3 132 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ANKRD30BLA7E2S9 258 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 A8MXE2 369 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 HCCSP53701 268 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 RPP30P78346 268 aaKnown RBP7.69□□□□□ -1.18
VPS36-201ENST00000378060 ESPNLQ6ZVH7 1005 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MFSD4AQ8N468 514 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 PFN4Q8NHR9 129 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 BTF3L4Q96K17 158 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ARL5BQ96KC2 179 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 OR52A5Q9H2C5 316 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 PLEKHA3Q9HB20 300 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 FTSJ1Q9UET6 329 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 A0A0A6YYJ9 748 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 TRAV1-2A0A0B4J238 106 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 SELENOFO60613 162 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 FOSL2P15408 326 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 SPI1P17947 270 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 M6PRP20645 277 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 CTHP32929 405 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MTCP1P56278 107 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 TAS2R30P59541 319 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ERVK-16P61578 105 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 MFAP5Q13361 173 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 ZNF77Q15935 545 aa7.69□□□□□ -1.18
VPS36-201ENST00000378060 DEFB133Q30KQ1 61 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms