RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 DHRS12A0PJE2 317 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 A6NIZ1 184 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 ATP5HO75947 161 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 PATE4P0C8F1 98 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 CD79AP11912 226 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 CALCRP30988 508 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 ARR3P36575 388 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 RAP1BP61224 184 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 RAP1AP62834 184 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 PIGFQ07326 219 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 GSG1Q2KHT4 349 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 SMARCD3Q6STE5 483 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 KRTAP1-3Q8IUG1 177 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 SH3GL3Q99963 347 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 CHID1Q9BWS9 393 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 MOV10Q9HCE1 1003 aaKnown RBP19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 GRHPRQ9UBQ7 328 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 LAMP3Q9UQV4 416 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 ARFGEF3Q5TH69 2177 aa19.49■□□□□ 0.71
ECHDC1-203ENST00000368291 MED13LQ71F56 2210 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 TCRBV3S1A0A5B6 114 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 H7C1C5 153 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 ARHGEF9O43307 516 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 CD8AP01732 235 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 OR8G3PP0DMU2 310 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 ZNF14P17017 642 aaPredicted RBP19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 CDAP32320 146 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 IFNGR2P38484 337 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 RASSF2P50749 326 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 ZNF84P51523 738 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 LCN6P62502 163 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 NPRL3Q12980 569 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 TSPAN31Q12999 210 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 NRN1LQ496H8 165 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 THEM4Q5T1C6 240 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 DPY19L2P2Q6ZN68 376 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 GNPDA2Q8TDQ7 276 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 NSMAFQ92636 917 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 NABP1Q96AH0 204 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 RASD2Q96D21 266 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 ZNF570Q96NI8 536 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 OR52D1Q9H346 318 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 POU2F3Q9UKI9 436 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 U3KQV3 271 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 VPS13CQ709C8 3753 aa19.48■□□□□ 0.71
ECHDC1-203ENST00000368291 ZNF469Q96JG9 3925 aaPredicted RBP19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 TEX13CA0A0J9YWL9 993 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 OVOL3O00110 214 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 SDHAP31040 664 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 RAB1AP62820 205 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 MRPS34P82930 218 aaKnown RBP19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 RFX4Q33E94 735 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 DTX2Q86UW9 622 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 SPATA24Q86W54 205 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 DEPDC4Q8N2C3 294 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 FANK1Q8TC84 345 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 TMEM171Q8WVE6 324 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 MS4A3Q96HJ5 214 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 RBP7Q96R05 134 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 DHRS9Q9BPW9 319 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 SAMHD1Q9Y3Z3 626 aaKnown RBP19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 IER3IP1Q9Y5U9 82 aa19.47■□□□□ 0.71
ECHDC1-203ENST00000368291 ITPR3Q14573 2671 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 SLC22A23A1A5C7 686 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 IMPA2O14732 288 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 SMPD2O60906 423 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 UBL3O95164 117 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 TXNDC12O95881 172 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 GASTP01350 101 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 CRYAAP02489 173 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 NR2C1P13056 603 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 GIPRP48546 466 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 ERFP50548 548 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 KRR1Q13601 381 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 GPR139Q6DWJ6 353 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 LURAP1LQ8IV03 231 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 LINC00471Q8N535 108 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 FNDC8Q8TC99 324 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 NANOS1Q8WY41 292 aaKnown RBP19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 SLCO4A1Q96BD0 722 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 TRAF4Q9BUZ4 470 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 NDEL1Q9GZM8 345 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 LRMDAQ9H2I8 198 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 DENND2DQ9H6A0 471 aaPredicted RBP19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 REEP1Q9H902 201 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 ATP23Q9Y6H3 246 aa19.46■□□□□ 0.71
ECHDC1-203ENST00000368291 IGHV2OR16-5A0A0B4J2B6 119 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PRSS37A4D1T9 235 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 CCNB2O95067 398 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PPP1R3DO95685 299 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 CST1P01037 141 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PAX1P15863 534 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 TTKP33981 857 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PTDSS1P48651 473 aaKnown RBP19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 HGFACQ04756 655 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 ETFDHQ16134 617 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 MICAQ29983 383 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 ZNF620Q6ZNG0 422 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 FOXL2NBQ6ZUU3 175 aa19.45■□□□□ 0.7
ECHDC1-203ENST00000368291 PTCHD4Q6ZW05 846 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms