RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CCDC74AQ96AQ1 378 aa13.95□□□□□ -0.18
LMNA-201ENST00000347559 FAM3DQ96BQ1 224 aa13.95□□□□□ -0.18
LMNA-201ENST00000347559 ZNF681Q96N22 645 aa13.95□□□□□ -0.18
LMNA-201ENST00000347559 CST11Q9H112 138 aa13.95□□□□□ -0.18
LMNA-201ENST00000347559 CHMP1AQ9HD42 196 aaPredicted RBP13.95□□□□□ -0.18
LMNA-201ENST00000347559 RXFP3Q9NSD7 469 aa13.95□□□□□ -0.18
LMNA-201ENST00000347559 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 TBC1D3BA6NDS4 549 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 TVP23AA6NH52 213 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 SRPX2O60687 465 aaPredicted RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 ABLIM3O94929 683 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 NDUFB2O95178 105 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ITGA5P08648 1049 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 SELLP14151 372 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 NID1P14543 1247 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ARHGAP11BQ3KRB8 267 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 TMPPEQ6ZT21 453 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ZNF619Q8N2I2 560 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 C15orf54Q8N8G6 183 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 PLPP7Q8NBV4 271 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 NKD1Q969G9 470 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 SLC6A7Q99884 636 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 MSRAQ9UJ68 235 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 INSL5Q9Y5Q6 135 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 OIP5O43482 229 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 CDC40O60508 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
LMNA-201ENST00000347559 SERPINA5P05154 406 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 DBIP07108 87 aaKnown RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 EIF2S3P41091 472 aaKnown RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 CXADRP78310 365 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ADAM8P78325 824 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ALG10BQ5I7T1 473 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 DCST2Q5T1A1 773 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 LPCAT3Q6P1A2 487 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 MTSS1LQ765P7 747 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 ZNF761Q86XN6 746 aaPredicted RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 SEH1LQ96EE3 360 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 NECAB3Q96P71 396 aaPredicted RBP13.94□□□□□ -0.18
LMNA-201ENST00000347559 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 RNF122Q9H9V4 155 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 FLRT3Q9NZU0 649 aa13.94□□□□□ -0.18
LMNA-201ENST00000347559 A0A1B0GV90 55 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 CD1AP06126 327 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 OR8U8P0C7N1 319 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 CYBAP13498 195 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 FOLR2P14207 255 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 CCKBRP32239 447 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SGCAQ16586 387 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 MST1LQ2TV78 715 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 Q3ZCU0 254 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 TMEM35AQ53FP2 167 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 GPX8Q8TED1 209 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 EDAQ92838 391 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 MRPL38Q96DV4 380 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 RHOVQ96L33 236 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 ALG12Q9BV10 488 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 PCBD2Q9H0N5 130 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SEC61A2Q9H9S3 476 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SRA1Q9HD15 236 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 METTL1Q9UBP6 276 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 VSIG4Q9Y279 399 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 PLXNA2O75051 1894 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 C17orf113A0A1B0GUU1 675 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 FITM1A5D6W6 292 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 C9JQL5 133 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 TACSTD2P09758 323 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 NME1P15531 152 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 ID4P47928 161 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 RAB2AP61019 212 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 PRDX1Q06830 199 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 CDNFQ49AH0 187 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 KLHL26Q53HC5 615 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 LRRC25Q8N386 305 aaPredicted RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 MRM2Q9UI43 246 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 LRRC72A6NJI9 287 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 M0R036 132 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 PSMB6P28072 239 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SSTP61278 116 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 RAB11BQ15907 218 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 LEG1Q6P5S2 330 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 IL34Q6ZMJ4 242 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 RNF44Q7L0R7 432 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 NPEPL1Q8NDH3 523 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 OR2L5Q8NG80 312 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 OR13C8Q8NGS7 320 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 RNF166Q96A37 237 aaPredicted RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 RRNAD1Q96FB5 475 aaKnown RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 ZNF514Q96K75 400 aaPredicted RBP13.93□□□□□ -0.18
LMNA-201ENST00000347559 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 SERTAD3Q9UJW9 196 aa13.93□□□□□ -0.18
LMNA-201ENST00000347559 USP34Q70CQ2 3546 aa13.92□□□□□ -0.18
LMNA-201ENST00000347559 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
LMNA-201ENST00000347559 ZNF729A6NN14 1252 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms