RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PMF1-BGLAPU3KQ54 211 aa12.65□□□□□ -0.38
ERCC1-203ENST00000340192 CR1P17927 2039 aa12.65□□□□□ -0.38
ERCC1-203ENST00000340192 C2CD3Q4AC94 2353 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 PDE5AO76074 875 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 LY6G6DO95868 133 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 SEMG1P04279 462 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF35P13682 527 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 THBS4P35443 961 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 SNRPD2P62316 118 aaKnown RBP12.64□□□□□ -0.39
ERCC1-203ENST00000340192 FMODQ06828 376 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 CD47Q08722 323 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 DAG1Q14118 895 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 RAB39AQ14964 217 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 SPATS1Q496A3 300 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 ZBED5Q49AG3 693 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 C10orf128Q5T292 105 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 KRT80Q6KB66 452 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF584Q8IVC4 421 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 CLDN22Q8N7P3 220 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 CCDC197Q8NCU1 140 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 OR52J3Q8NH60 311 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
ERCC1-203ENST00000340192 NSMCE2Q96MF7 247 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF442Q9H7R0 627 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 SMURF2Q9HAU4 748 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 FBXL3Q9UKT7 428 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF346Q9UL40 294 aaKnown RBP12.64□□□□□ -0.39
ERCC1-203ENST00000340192 TMEM5Q9Y2B1 443 aa12.64□□□□□ -0.39
ERCC1-203ENST00000340192 NSD1Q96L73 2696 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-203ENST00000340192 IGKV1D-43A0A0B4J1Z2 117 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 TRBV4-1A0A0J9YWV2 114 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 B2RBV5 119 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 B9A039 149 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 HEXAP06865 529 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NR2C1P13056 603 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF26P17031 533 aaPredicted RBP12.63□□□□□ -0.39
ERCC1-203ENST00000340192 ITGA2P17301 1181 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NPR2P20594 1047 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NR4A1P22736 598 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 CDAP32320 146 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
ERCC1-203ENST00000340192 SEC23BQ15437 767 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 EFNB3Q15768 340 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 IQCCQ4KMZ1 466 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 FAM205BPQ63HN1 556 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 SLC16A14Q7RTX9 510 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 MAPK1IP1LQ8NDC0 245 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF519Q8TB69 540 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NSMAFQ92636 917 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 NSL1Q96IY1 281 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 DHRS1Q96LJ7 313 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 ALG12Q9BV10 488 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 PLK3Q9H4B4 646 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 RNF121Q9H920 327 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 UGT2A1Q9Y4X1 527 aa12.63□□□□□ -0.39
ERCC1-203ENST00000340192 A6NIZ1 184 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 LY6HO94772 140 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 SERPINA5P05154 406 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 RPL4P36578 427 aaKnown RBP12.62□□□□□ -0.39
ERCC1-203ENST00000340192 OMPP47874 163 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 LIMS1P48059 325 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 EFNA4P52798 201 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 RAP1BP61224 184 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 RAP1AP62834 184 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 ERVK-25P63136 954 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 MRPS34P82930 218 aaKnown RBP12.62□□□□□ -0.39
ERCC1-203ENST00000340192 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 THEM4Q5T1C6 240 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 CLEC2AQ6UVW9 174 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 ARIH2OSQ8N7S6 290 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 MCUR1Q96AQ8 359 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 RBP7Q96R05 134 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 RHNO1Q9BSD3 238 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 FUZQ9BT04 418 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 SIAEQ9HAT2 523 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 ADAM21Q9UKJ8 722 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 ADAM18Q9Y3Q7 739 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
ERCC1-203ENST00000340192 IGHV4-30-2A0A087WSY4 118 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 SH3PXD2BA1X283 911 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 GPRIN2O60269 458 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 GADD45GO95257 159 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 F12P00748 615 aaPredicted RBP12.61□□□□□ -0.39
ERCC1-203ENST00000340192 FABP3P05413 133 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 CD14P08571 375 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 SMIM11AP58511 58 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 DSCR9P59020 149 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 GALK2Q01415 458 aa12.61□□□□□ -0.39
ERCC1-203ENST00000340192 SPIBQ01892 262 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms