RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 UPRTQ96BW1 309 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 CHST11Q9NPF2 352 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 PTBP1P26599 531 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP42-201ENST00000306177 ALDH3B1P43353 468 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 RAB4BP61018 213 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 LPCAT3Q6P1A2 487 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 VHLLQ6RSH7 139 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 COL4A1P02462 1669 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 C1orf196B1AJZ1 125 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 VAMP5O95183 116 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 IFNA17P01571 189 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 CHRNB1P11230 501 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 RRAS2P62070 204 aaPredicted RBP14.6□□□□□ -0.07
USP42-201ENST00000306177 ACSM5Q6NUN0 579 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 OVCH1Q7RTY7 1134 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 KDM8Q8N371 416 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 UCN3Q969E3 161 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 THOC3Q96J01 351 aaKnown RBP14.6□□□□□ -0.07
USP42-201ENST00000306177 SLC17A4Q9Y2C5 497 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 NTNG1Q9Y2I2 539 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 TNFSF12O43508 249 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 LILRB5O75023 590 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 MCCD1P59942 119 aaPredicted RBP14.6□□□□□ -0.07
USP42-201ENST00000306177 PEA15Q15121 130 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 BEX5Q5H9J7 111 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 TAAR8Q969N4 342 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 SDSLQ96GA7 329 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 PFDN5Q99471 154 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 PDCD1LG2Q9BQ51 273 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 LUZP4Q9P127 313 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 K7EPK0 472 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 UPK1AO00322 258 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 ACHEP22303 614 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 CCL11P51671 97 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 HSF1Q00613 529 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 B4GALNT1Q00973 533 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 LINC00299Q6ZSB3 139 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 SYT9Q86SS6 491 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 WDR5BQ86VZ2 330 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 FAM71E2Q8N5Q1 922 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 SLC25A46Q96AG3 418 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 DCLRE1CQ96SD1 692 aaKnown RBP14.6□□□□□ -0.07
USP42-201ENST00000306177 CDCA4Q9BXL8 241 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 HINT3Q9NQE9 182 aaKnown RBP14.6□□□□□ -0.07
USP42-201ENST00000306177 ACOXLQ9NUZ1 547 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 E9PI62 339 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 CHATP28329 748 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 SDHAP31040 664 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 BTG2P78543 158 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 RIMKLAQ8IXN7 391 aa14.6□□□□□ -0.07
USP42-201ENST00000306177 A0A1B0GTL3 188 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 DSCR3O14972 297 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 MALSU1Q96EH3 234 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 GCM1Q9NP62 436 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 OR51B4Q9Y5P0 310 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 ARRDC5A6NEK1 342 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 SRPXP78539 464 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 LIPNQ5VXI9 398 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 TCTN3Q6NUS6 607 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 GLIPR1L1Q6UWM5 242 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 PTOV1Q86YD1 416 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 C16orf52Q8NHV5 167 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 LIPHQ8WWY8 451 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 PIGTQ969N2 578 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 APH1AQ96BI3 265 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 PIGLQ9Y2B2 252 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 A0A1W2PPV4 95 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 C2CD4DB7Z1M9 353 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 HSPB6O14558 160 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 IGFBP1P08833 259 aaPredicted RBP14.59□□□□□ -0.07
USP42-201ENST00000306177 HIST1H1CP16403 213 aaKnown RBP14.59□□□□□ -0.07
USP42-201ENST00000306177 HOXC8P31273 242 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 CAMK2BQ13554 666 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 OR5M1Q8NGP8 315 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 RPS10P5Q9NQ39 176 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 TRABD2BA6NFA1 517 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 FXYD1O00168 92 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 PPP3CBP16298 524 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 RAB6AP20340 208 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 ZNF133P52736 654 aaPredicted RBP14.59□□□□□ -0.07
USP42-201ENST00000306177 FAM53BQ14153 422 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 LACC1Q8IV20 430 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 LYSMD2Q8IV50 215 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 TMEM99Q8N816 258 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 SECTM1Q8WVN6 248 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 SSX3Q99909 188 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 SLC38A1Q9H2H9 487 aa14.59□□□□□ -0.07
USP42-201ENST00000306177 COL5A3P25940 1745 aaPredicted RBP14.58□□□□□ -0.07
USP42-201ENST00000306177 TTC3P53804 2025 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 TOR1AO14656 332 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 ZNF728P0DKX0 622 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 SPI1P17947 270 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 ACSM1Q08AH1 577 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 PMPCAQ10713 525 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 NAXDQ8IW45 347 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 FBXL6Q8N531 539 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 TSLPQ969D9 159 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 FKRPQ9H9S5 495 aa14.58□□□□□ -0.07
USP42-201ENST00000306177 GNG12Q9UBI6 72 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms