RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ABHD17BQ5VST6 288 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 YRDCQ86U90 279 aaKnown RBP19.91■□□□□ 0.78
SMAD1-201ENST00000302085 GPAT4Q86UL3 456 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 NR2C2APQ86WQ0 139 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 TEX19Q8NA77 164 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 HSD17B8Q92506 261 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 IKZF2Q9UKS7 526 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 CMAHPQ9Y471 501 aa19.91■□□□□ 0.78
SMAD1-201ENST00000302085 LOC102725191A0A1B0GVB3 256 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SLC35F4A4IF30 521 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 CENPBD1B2RD01 187 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 PHYHO14832 338 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SEC14L5O43304 696 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 CD82P27701 267 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 RAC1P63000 192 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 H3F3AP84243 136 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 FAM220AQ7Z4H9 259 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 LAX1Q8IWV1 398 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 MAP6Q96JE9 813 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 CEP19Q96LK0 163 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 PRRX2Q99811 253 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 MIXL1Q9H2W2 232 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 ABCB9Q9NP78 766 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 A0A087WV48 116 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 KHDRBS3O75525 346 aaKnown RBP19.9■□□□□ 0.78
SMAD1-201ENST00000302085 NEURL1O76050 574 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SERPINA3P01011 423 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SPARCP09486 303 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 ADAM8P78325 824 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 FOXO1Q12778 655 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 ZMAT1Q5H9K5 638 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SPANXN2Q5MJ10 180 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 DNM1P34Q6PK57 102 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SLC26A10Q8NG04 563 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 WDFY2Q96P53 400 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SIGLEC12Q96PQ1 595 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 ATF6BQ99941 703 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 SLC30A2Q9BRI3 323 aa19.9■□□□□ 0.78
SMAD1-201ENST00000302085 A0A0J9YW62 118 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 GPRIN2O60269 458 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 ZNF12P17014 697 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 ATP1A1-AS1Q5TC04 95 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 UNQ9370/PRO34162Q6UXP9 181 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 ASB17Q8WXJ9 295 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 AP3S1Q92572 193 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 FREM3P0C091 2139 aa19.89■□□□□ 0.77
SMAD1-201ENST00000302085 ZFPL1O95159 310 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 CD97P48960 835 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 CAMK2DQ13557 499 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 SLC18B1Q6NT16 456 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 Q6ZNX1 250 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 OR14L1PQ8NHC6 308 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 FER1L6-AS2Q96M78 137 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 RBP7Q96R05 134 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 OR8B4Q96RC9 309 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 UTP23Q9BRU9 249 aaKnown RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 ASCL3Q9NQ33 180 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 PLA2G3Q9NZ20 509 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 FRRS1LQ9P0K9 344 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 NCKAP5O14513 1909 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 A0A1B0GTH9 108 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 MRPL28Q13084 256 aaKnown RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 ALKBH1Q13686 389 aaKnown RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 FAM83FQ8NEG4 500 aaPredicted RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 OR6X1Q8NH79 312 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 RGP1Q92546 391 aaPredicted RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 NSMAFQ92636 917 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 SLC25A44Q96H78 314 aaPredicted RBP19.88■□□□□ 0.77
SMAD1-201ENST00000302085 ZFP64Q9NPA5 681 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 RASD1Q9Y272 281 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 ZNF281Q9Y2X9 895 aa19.88■□□□□ 0.77
SMAD1-201ENST00000302085 A0A1W2PPK0 400 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 UPK1BO75841 260 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 WDPCPO95876 746 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 PGA4P0DJD7 388 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 PGA3P0DJD8 388 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 ZNF43P17038 809 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 CSRP1P21291 193 aaKnown RBP19.87■□□□□ 0.77
SMAD1-201ENST00000302085 SLC17A1Q14916 467 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 PAMR1Q6UXH9 720 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 LINC00696Q6ZRV3 163 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 TPRA1Q86W33 373 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 HAVCR2Q8TDQ0 301 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 OR14A2Q96R54 314 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 SDHCQ99643 169 aaPredicted RBP19.87■□□□□ 0.77
SMAD1-201ENST00000302085 TTYH2Q9BSA4 534 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 ABHD6Q9BV23 337 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 ELOVL3Q9HB03 270 aa19.87■□□□□ 0.77
SMAD1-201ENST00000302085 MRPS18CQ9Y3D5 142 aaKnown RBP19.87■□□□□ 0.77
SMAD1-201ENST00000302085 H0YC42 278 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 TNFSF11O14788 317 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 GATBO75879 557 aaKnown RBP19.86■□□□□ 0.77
SMAD1-201ENST00000302085 UCHL1P09936 223 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 MYL9P24844 172 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 CASRP41180 1078 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 EIF2B1Q14232 305 aaKnown RBP19.86■□□□□ 0.77
SMAD1-201ENST00000302085 RGS21Q2M5E4 152 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 THEM4Q5T1C6 240 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 LRRN1Q6UXK5 716 aa19.86■□□□□ 0.77
SMAD1-201ENST00000302085 ZNF454Q8N9F8 522 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms