RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 COPS7AQ9UBW8 275 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 CHRNA9Q9UGM1 479 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 CNOT1A5YKK6 2376 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FREM3P0C091 2139 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 IGKV1D-42A0A075B6H8 117 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 PRR32B1ATL7 298 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LPLP06858 475 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 RAB3BP20337 219 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 MST1P26927 711 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FGF9P31371 208 aaPredicted RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 NXPH1P58417 271 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SSTP61278 116 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 RELQ04864 619 aaPredicted RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LTBQ06643 244 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 RPL18Q07020 188 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FUT7Q11130 342 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF169Q14929 603 aaPredicted RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 MEP1BQ16820 701 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FAM74A1Q5RGS3 127 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 NLRC3Q7RTR2 1065 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LIX1LQ8IVB5 337 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ZFP82Q8N141 532 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 OR5M1Q8NGP8 315 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 C2CD4CQ8TF44 421 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 TAAR8Q969N4 342 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LCORQ96JN0 433 aaPredicted RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 AUNIPQ9H7T9 357 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 NOX4Q9NPH5 578 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SLCO1C1Q9NYB5 712 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SERTAD3Q9UJW9 196 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 KLHDC2Q9Y2U9 406 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 H0YIG0 161 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 TIAF1O95411 115 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 MAS1P04201 325 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 RLN1P04808 185 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SLC6A1P30531 599 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 EIF1AXP47813 144 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 PITPNBP48739 271 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ETFDHQ16134 617 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 RPL13AP3Q6NVV1 102 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SLC16A13Q7RTY0 426 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 C9orf40Q8IXQ3 194 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SLC38A9Q8NBW4 561 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 NPEPL1Q8NDH3 523 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 WNT2BQ93097 391 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 CCDC74AQ96AQ1 378 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 NCDNQ9UBB6 729 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF337Q9Y3M9 751 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FMO6PO60774 539 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 TRIM3O75382 744 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SIRPAP78324 504 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SERTAD2Q14140 314 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF141Q15928 474 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 RNLSQ5VYX0 342 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 WBP2NLQ6ICG8 309 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 GUSBP11Q6P575 273 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 PLXDC1Q8IUK5 500 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 OR6C1Q96RD1 312 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 DUSP15Q9H1R2 295 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 AKIRIN1Q9H9L7 192 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 TMEM138Q9NPI0 162 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SOX1O00570 391 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 EIF1AYO14602 144 aaKnown RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ARPC1BO15143 372 aaKnown RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 PDGFBP01127 241 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ADRB1P08588 477 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SFTPCP11686 197 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ATF1P18846 271 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 AFF3P51826 1226 aaKnown RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 FBXW4P57775 412 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 EGR4Q05215 589 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ATXN7L3Q14CW9 347 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 KLHL26Q53HC5 615 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 CLLU1Q5K131 121 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 PHF19Q5T6S3 580 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 CD200R1LQ6Q8B3 271 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 METAP1DQ6UB28 335 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 C5orf46Q6UWT4 87 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SLC29A4Q7RTT9 530 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 MAMDC2Q7Z304 686 aaPredicted RBP9.15□□□□□ -0.94
FOXN4-201ENST00000299162 ADGRG3Q86Y34 549 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 HLA-CQ95604 372 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SORCS2Q96PQ0 1159 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 DLL4Q9NR61 685 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 RXFP3Q9NSD7 469 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 KCNMB2Q9Y691 235 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 KIF26BQ2KJY2 2108 aa9.15□□□□□ -0.94
FOXN4-201ENST00000299162 SLC22A23A1A5C7 686 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 FAM74A7A6NL05 159 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 MASP2O00187 686 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 SGCEO43556 437 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 ANKRD34CP0C6C1 535 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 IL11P20809 199 aa9.15□□□□□ -0.95
FOXN4-201ENST00000299162 PTAFRP25105 342 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms