RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-201ENST00000265304 PTP4A1Q93096 173 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 LRRC46Q96FV0 321 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 NMNAT3Q96T66 252 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 NELFAQ9H3P2 528 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-201ENST00000265304 FAM118AQ9NWS6 357 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 ORC6Q9Y5N6 252 aa12.54□□□□□ -0.4
SSBP1-201ENST00000265304 IGKV1D-43A0A0B4J1Z2 117 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 C16orf97H3BN30 126 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 DCTN6O00399 190 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
SSBP1-201ENST00000265304 SNAP29O95721 258 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 IFNGP01579 166 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 PPP3CBP16298 524 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 POU1F1P28069 291 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 NOS3P29474 1203 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CRABP1P29762 137 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CCKARP32238 428 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 GGT2P36268 569 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 PTDSS1P48651 473 aaKnown RBP12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CENPAP49450 140 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CLRN1P58418 232 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ADARB1P78563 741 aaKnown RBP12.53□□□□□ -0.4
SSBP1-201ENST00000265304 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■□□□□ 8.3
SSBP1-201ENST00000265304 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 KEAP1Q14145 624 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 TMEM236Q5W0B7 351 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
SSBP1-201ENST00000265304 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 SLC37A3Q8NCC5 494 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 STEAP2Q8NFT2 490 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 OR52E2Q8NGJ4 325 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-201ENST00000265304 WACQ9BTA9 647 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 TEX12Q9BXU0 123 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 SYT4Q9H2B2 425 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 B9D1Q9UPM9 204 aa12.53□□□□□ -0.4
SSBP1-201ENST00000265304 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 NKX2-6A6NCS4 301 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 H0YAE9 185 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 M0R3G1 203 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 SLC2A10O95528 541 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 HRGP04196 525 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 CTLA4P16410 223 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 SNRPGP62308 76 aaKnown RBP12.52□□□□□ -0.41
SSBP1-201ENST00000265304 CRMP1Q14194 572 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 LRRC36Q1X8D7 754 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 SLC35F1Q5T1Q4 408 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 CXorf67Q86X51 503 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-201ENST00000265304 OR8J1Q8NGP2 316 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 OR1K1Q8NGR3 316 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 NABP1Q96AH0 204 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 MARCH7Q9H992 704 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 OBP2BQ9NPH6 170 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 TMEM38BQ9NVV0 291 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.41
SSBP1-201ENST00000265304 LOC100130705A0A1B0GUX0 176 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 OR5H1A6NKK0 313 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 KHDRBS3O75525 346 aaKnown RBP12.51□□□□□ -0.41
SSBP1-201ENST00000265304 RENP00797 406 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 ZNF3P17036 446 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 GABRB1P18505 474 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 NPR2P20594 1047 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 SLC2A5P22732 501 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
SSBP1-201ENST00000265304 FMODQ06828 376 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 CD47Q08722 323 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 PCK2Q16822 640 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 AADACL4Q5VUY2 407 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 CARD17Q5XLA6 110 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 LEG1Q6P5S2 330 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 SEZ6L2Q6UXD5 910 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 USP51Q70EK9 711 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 BHLHA15Q7RTS1 189 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-201ENST00000265304 DPPA2Q7Z7J5 298 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 JAZF1Q86VZ6 243 aa12.51□□□□□ -0.41
SSBP1-201ENST00000265304 UBE2J2Q8N2K1 259 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms