RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RELL2Q8NC24 303 aaPredicted RBP13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 SETD9Q8NE22 299 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 FNDC8Q8TC99 324 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 APH1BQ8WW43 257 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 ZNRF4Q8WWF5 429 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 NSMAFQ92636 917 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 RERGLQ9H628 205 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 CRLF2Q9HC73 371 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 SRA1Q9HD15 236 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 ASB6Q9NWX5 421 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 UPB1Q9UBR1 384 aa13.94□□□□□ -0.18
CCDC90B-201ENST00000260054 KRT33AO76009 404 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 NR2C1P13056 603 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 SPI1P17947 270 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 MYF6P23409 242 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 SLC25A1P53007 311 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 FAPQ12884 760 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 ZBTB46Q86UZ6 589 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 OR51L1Q8NGJ5 315 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 CNIH3Q8TBE1 160 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 OR51V1Q9H2C8 321 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 GPR35Q9HC97 309 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 DNAJC27Q9NZQ0 273 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 B9D1Q9UPM9 204 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 FKBP7Q9Y680 259 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 HSPE1-MOB4S4R3N1 261 aa13.93□□□□□ -0.18
CCDC90B-201ENST00000260054 NCOA6Q14686 2063 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 IGLV1-36A0A0B4J1U3 117 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 FAM171A2A8MVW0 826 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 DVL2O14641 736 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 DHHO43323 396 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 MPZL2O60487 215 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 SLC2A5P22732 501 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 CRABP1P29762 137 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 PYCR1P32322 319 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 CEACAM16Q2WEN9 425 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 SLC25A30Q5SVS4 291 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 C10orf128Q5T292 105 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 NXNL2Q5VZ03 156 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 ZNF474Q6S9Z5 364 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 Q6ZT83 130 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 THAP5Q7Z6K1 395 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 LUZP2Q86TE4 346 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 OR2T4Q8NH00 348 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 CNBD2Q96M20 576 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 ZNF582Q96NG8 517 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 PIGMQ9H3S5 423 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 B3GAT2Q9NPZ5 323 aa13.92□□□□□ -0.18
CCDC90B-201ENST00000260054 EEF1E1-BLOC1S5C9J1V9 151 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 ZNF587BE7ETH6 402 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 RPL36A-HNRNPH2H7BZ11 118 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 MSTNO14793 375 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 EEF1E1O43324 174 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 DENRO43583 198 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 ENTPD6O75354 484 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 WBP4O75554 376 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 CNOT4O95628 575 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 GPANK1O95872 356 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 OCLNQ16625 522 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 KLHL12Q53G59 568 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 C9orf135Q5VTT2 229 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 GABRG1Q8N1C3 465 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 PROKR2Q8NFJ6 384 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 FBLIM1Q8WUP2 373 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 FOXN4Q96NZ1 517 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 RBM24Q9BX46 236 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 RACGAP1Q9H0H5 632 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 JKAMPQ9P055 326 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 COA3Q9Y2R0 106 aaPredicted RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 UGT2A1Q9Y4X1 527 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 PCDHGB5Q9Y5G0 923 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 A8MXE2 369 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 KHDRBS3O75525 346 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 ITGA5P08648 1049 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 CHRNB4P30926 498 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 CDK5R2Q13319 367 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 SMN1Q16637 294 aaKnown RBP13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 LINC01590Q5TEZ4 76 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 LAIR2Q6ISS4 152 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 MTFR2Q6P444 385 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 DNM1P34Q6PK57 102 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 LYPD4Q6UWN0 246 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 B3GLCTQ6Y288 498 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 MRGPRGQ86SM5 289 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 HTRA1Q92743 480 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 Q9H521 79 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 COQ3Q9NZJ6 369 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
CCDC90B-201ENST00000260054 CCDC182A6NF36 153 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 PRODHO43272 600 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 SEC14L2O76054 403 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 CDAP32320 146 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 APOFQ13790 326 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 CDSNQ15517 529 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 MEDAGQ5VYS4 303 aa13.9□□□□□ -0.18
CCDC90B-201ENST00000260054 OTPQ5XKR4 325 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms