RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 RANBP3Q9H6Z4 567 aaPredicted RBP8.25□□□□□ -1.09
SYDE2-201ENST00000234668 SYNDIG1Q9H7V2 258 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 EMC7Q9NPA0 242 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 MRPL22Q9NWU5 206 aaKnown RBP8.25□□□□□ -1.09
SYDE2-201ENST00000234668 COA3Q9Y2R0 106 aaPredicted RBP8.25□□□□□ -1.09
SYDE2-201ENST00000234668 LRP4O75096 1905 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 MEIKINA0A087WXM9 373 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 TLCD2A6NGC4 264 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 H3BML4 177 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 RAF1P04049 648 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 POU3F4P49335 361 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 SPOCK1Q08629 439 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 DMWDQ09019 674 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 CAMK2BQ13554 666 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 EXOSC2Q13868 293 aaKnown RBP8.25□□□□□ -1.09
SYDE2-201ENST00000234668 INPP5JQ15735 1006 aaPredicted RBP8.25□□□□□ -1.09
SYDE2-201ENST00000234668 GRK1Q15835 563 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 C2orf76Q3KRA6 126 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 TCTE1Q5JU00 501 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 SFRP5Q5T4F7 317 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 ASPHD2Q6ICH7 369 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 FAM71CQ8NEG0 241 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 HAVCR1Q96D42 359 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 KLHL15Q96M94 604 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 SLC46A1Q96NT5 459 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 VN1R1Q9GZP7 353 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 FSCN3Q9NQT6 498 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 CENPMQ9NSP4 180 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 MED29Q9NX70 200 aa8.25□□□□□ -1.09
SYDE2-201ENST00000234668 IGKV1D-43A0A0B4J1Z2 117 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 IGKV3-11P04433 115 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 VSIG10L2P0DP72 767 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GP1BBP13224 206 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 FBXW4P57775 412 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 PSMA6P60900 246 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 EEF1A1P5Q5VTE0 462 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZNF782Q6ZMW2 699 aaPredicted RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 NDUFAF7Q7L592 441 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZNF627Q7L945 461 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ADGRG3Q86Y34 549 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GPR148Q8TDV2 347 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GPR137Q96N19 417 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 COMMD4Q9H0A8 199 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ATG5Q9H1Y0 275 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 MRPL39Q9NYK5 338 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 MED11Q9P086 117 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 FER1L5A0AVI2 2057 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 TMED7-TICAM2A0A0A6YYA0 188 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 A0A1B0GVI7 797 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 A0A1W2PR77 199 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZSCAN5BA6NJL1 495 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 I3L521 148 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 M0QYG6 137 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 TNFRSF10AO00220 468 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GSTZ1O43708 216 aaPredicted RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 BGLAPP02818 100 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 SLC25A1P53007 311 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 C19orf57Q0VDD7 668 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 DYRK1AQ13627 763 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 KRT77Q7Z794 578 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 OR51S1Q8NGJ8 323 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 OR4C16Q8NGL9 310 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 MIB2Q96AX9 1013 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 MRPL48Q96GC5 212 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZDHHC12Q96GR4 267 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GPX7Q96SL4 187 aaPredicted RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GINS4Q9BRT9 223 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 PTDSS2Q9BVG9 487 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 SLC19A3Q9BZV2 496 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 SLC7A5P2Q9GIP4 190 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ADAM19Q9H013 955 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZNF304Q9HCX3 659 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GPR27Q9NS67 375 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 TMED7Q9Y3B3 224 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 PRRC2CQ9Y520 2896 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GDF9O60383 454 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 CD3DP04234 171 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 GTF2F2P13984 249 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 BCKDHBP21953 392 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 LCN1P31025 176 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 CSF2RBP32927 897 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 EIF2B1Q14232 305 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 CSRP2Q16527 193 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 FAM209AQ5JX71 171 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ARSKQ6UWY0 536 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZNF767PQ75MW2 155 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 ZNF440Q8IYI8 595 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 FAM109AQ8N4B1 249 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 SLC38A9Q8NBW4 561 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 OTOSQ8NHW6 89 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 NXPE2Q96DL1 559 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 C4orf45Q96LM5 186 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 WWTR1Q9GZV5 400 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 TAS2R4Q9NYW5 299 aa8.24□□□□□ -1.09
SYDE2-201ENST00000234668 CDV3Q9UKY7 258 aaKnown RBP8.24□□□□□ -1.09
SYDE2-201ENST00000234668 FAM186AA6NE01 2351 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms