RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Cobll1Q3UMF0 1273 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 CebpeQ6PZD9 281 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Cpt1cQ8BGD5 798 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gm6812B1AXU1 112 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 1700020N15RikL7MTX3 112 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Thbs1P35441 1170 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc37a3Q3TIT8 494 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 MidnQ3TPJ7 465 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1048Q8VGS2 320 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Rpl11Q9CXW4 178 aaKnown RBP17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 PkdrejQ9Z0T6 2126 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 A730046J19RikA0A1B0GSN8 89 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gm14412A2ARR7 526 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gsg1l2M0QWL6 290 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 NdnP25233 325 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Nsg1Q62092 185 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Aph1aQ8BVF7 265 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc5a11Q8K0E3 673 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr676Q8VGZ9 317 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gm17657E9PWY5 170 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gxylt1Q3UHH8 404 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 E2f1Q61501 430 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 ErfeQ6PGN1 340 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 MroQ7TNB4 248 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 AspaQ8R3P0 312 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Vmn1r42Q8VBS7 329 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Ears2Q9CXJ1 523 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc22a17Q9D9E0 401 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Spatc1lQ9D9W0 342 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1095A3KPP7 308 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr740E9PV79 311 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Esp3J3QN49 87 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Vmn2r109K7N747 858 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Rbp2Q08652 134 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Q3UTZ3 580 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 WdcpQ6NV72 663 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Tmem268Q8R239 342 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Ceacam20Q9D2Z1 577 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc46a3Q9DC26 460 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Mllt1Q9ERL0 547 aa17.23■□□□□ 0.35
Trim71-201ENSMUST00000111816 Tas2r116Q7M713 305 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1085Q7TR64 313 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Ccdc116Q80X53 541 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Fam103a1Q9CQY2 119 aaKnown RBP17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Lamp1P11438 406 aaKnown RBP17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Hoxb13P70321 286 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Fstl4Q5STE3 841 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Znf185Q62394 352 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Kcnc3Q63959 769 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Nudt6Q8CH40 313 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 TspearJ3S6Y1 670 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Mmp7Q10738 264 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Methig1Q76I26 264 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Rell2Q8BRJ3 303 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr597L7N224 315 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Cxcl12P40224 93 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 CochQ62507 552 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr598Q7TRR2 319 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc22a29Q8BWG6 551 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr262Q8VFV8 312 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr50Q8VGK5 312 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gpr146Q99LE2 333 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Mcts1Q9DB27 181 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 ElobP62869 118 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gpr143P70259 405 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Slc35b2Q91ZN5 431 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Necap1Q9CR95 275 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Zfp937A2ANU7 503 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1188A2AV10 312 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Tfap2bQ61313 459 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Fam124bQ8BLQ0 456 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 CebpzosQ8BTE5 80 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Vmn1r38Q8R2E1 302 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr639Q8VGY8 316 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr73Q920P2 313 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Cyc1Q9D0M3 325 aaKnown RBP17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Exo1Q9QZ11 837 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 AtrnQ9WU60 1428 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 TyrobpO54885 114 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Lgals3P16110 264 aaKnown RBP17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 SrmQ64674 302 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 P2ry4Q9JJS7 361 aa17.22■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1458A0A1L1SSD5 307 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Catsperg1E9Q355 1151 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Nrg2P56974 756 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Emx1Q04742 257 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Gpr39Q5U431 456 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 ItpkcQ7TS72 678 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Man2b1O09159 1013 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Hmx3P42581 356 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Fam171bQ14CH0 825 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1216Q7TR05 311 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Mettl21AQ9CQL0 218 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Tbpl1P62340 186 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Tarbp2P97473 365 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1386Q7TQT0 309 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1321Q7TQW4 319 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Olfr1128Q7TR47 311 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Q9CQT9 129 aa17.21■□□□□ 0.35
Trim71-201ENSMUST00000111816 Sptan1P16546 2472 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms