RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Kcnmb4Q9JIN6 210 aa9.52□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm20715E9Q3L7 95 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn2r117K7N6V1 857 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm3633L7N233 213 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm9611L7N476 213 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pfdn2O70591 154 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Galr3O88853 370 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 SnrpbP27048 231 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Aqp2P56402 271 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pcbd1P61458 104 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gramd2bQ6PEM6 445 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tspan12Q8BKT6 305 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Spata33Q8C624 132 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1497Q8VG11 314 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Plpp7Q91WB2 271 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hsbp1Q9CQZ1 76 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tmeff2Q9QYM9 374 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 SktA2AQ25 1946 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1076A2AK60 313 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ms4a7E9Q9V5 267 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm21820J3KMU2 361 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r20K7N778 303 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ClppO88696 272 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 H2-T3P14432 384 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gdf7P43029 461 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fkbp2P45878 140 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nat1P50294 290 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Eif4ebp2P70445 120 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cdk10Q3UMM4 360 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Krt33bQ61897 404 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Prss34Q80UR4 318 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc25a32Q8BMG8 316 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Neil1Q8K4Q6 389 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr461Q8VF30 313 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr133Q8VG94 312 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc7a13Q91WN3 478 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mrm1Q99J25 320 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Phf19Q9CXG9 578 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cldnd2Q9D9H2 167 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Chrm3Q9ERZ3 589 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Psmb3Q9R1P1 205 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Sema6cQ9WTM3 931 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r152E9Q9N3 307 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r104L7N293 307 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nipsnap2O55126 281 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Prph2P15499 346 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 FapP97321 761 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fbxo7Q3U7U3 523 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 B3gnt6Q3USF0 391 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Xkr7Q5GH64 580 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Nrsn2Q5HZK2 202 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Q5SPV6 233 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Kcnc3Q63959 769 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 CslQ80X68 466 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc25a44Q8BGF9 314 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr522Q8VGL1 312 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hspb2Q99PR8 182 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc25a18Q9DB41 320 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mettl11bB2RXM4 283 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 1700080E11RikE9Q9G1 206 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Gm2056J3QQ02 144 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 DdostO54734 441 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ca3P16015 260 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Wnt3P17553 355 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pou3f1P21952 449 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Otx2P80206 289 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1219Q7TR04 311 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fam69cQ8BQT2 410 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 FarsaQ8C0C7 508 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 C1rbQ8CFG9 706 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc35b4Q8CIA5 331 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Noxa1Q8CJ00 444 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr510Q8VEW6 314 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr1347Q8VF33 319 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr800Q8VFH7 311 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Slc23a2Q9EPR4 648 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Pard6gQ9JK84 382 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ChrdQ9Z0E2 948 aa9.51□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tmsb15aA2AEH9 79 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Macc1E9PXX8 851 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Foxq1O70220 400 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Elavl1P70372 326 aaKnown RBP9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Riiad1Q3KNY5 119 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr140Q60878 302 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr524Q7TRU0 318 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr70Q80ZX9 316 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Zadh2Q8BGC4 377 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Agpat4Q8K4X7 378 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Mmd2Q8R189 247 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r23Q8R2D0 302 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr52Q8VFL0 319 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Egln3Q91UZ4 239 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 1700029P11RikQ9CQ68 150 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 9230104L09RikQ9D264 133 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ndrg3Q9QYF9 375 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Trbv2A0A0B4J1G8 114 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Igkv6-29A0A0G2JEI6 115 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fam90a1aA2A4E2 429 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fthl17bA2AHC5 176 aa9.5□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Fthl17cA2AHC6 176 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms