RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SYT14Q8NB59 555 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 NUP37Q8NFH4 326 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 MOSPD2Q8NHP6 518 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 LIPHQ8WWY8 451 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ASB10Q8WXI3 467 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 BPIFA2Q96DR5 249 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ZNF347Q96SE7 839 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 VRK1Q99986 396 aaPredicted RBP11.97□□□□□ -0.49
PNKP-228ENST00000637325 RNF121Q9H920 327 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ABCD2Q9UBJ2 740 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 EGFL7Q9UHF1 273 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 FBXL3Q9UKT7 428 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 SNX13Q9Y5W8 968 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 FKBP7Q9Y680 259 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 ABCA2Q9BZC7 2435 aa11.97□□□□□ -0.49
PNKP-228ENST00000637325 CENPBD1B2RD01 187 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 TRMUO75648 421 aaKnown RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 TP53P04637 393 aaPredicted RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 ACADSP16219 412 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 NPR2P20594 1047 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 PCSK6P29122 969 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 GIPRP48546 466 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 GALK2Q01415 458 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 RUNX1T1Q06455 604 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 SNTB2Q13425 540 aaKnown RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 TOP3AQ13472 1001 aaPredicted RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 ADIPOQQ15848 244 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 ALG10Q5BKT4 473 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 GLYATQ6IB77 296 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 KRT80Q6KB66 452 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 TMEM53Q6P2H8 277 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 SKA3Q8IX90 412 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 NRMQ8IXM6 262 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 NOXO1Q8NFA2 376 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 FAM168AQ92567 244 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 MCHR2Q969V1 340 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 MS4A3Q96HJ5 214 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 NOX3Q9HBY0 568 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 ARL2BPQ9Y2Y0 163 aa11.96□□□□□ -0.49
PNKP-228ENST00000637325 FAM32AQ9Y421 112 aaKnown RBP11.96□□□□□ -0.49
PNKP-228ENST00000637325 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 IGHV4-30-2A0A087WSY4 118 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 hCG_2039718K7EN88 272 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 CSF3P09919 207 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 PATE4P0C8F1 98 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 CTXN1P60606 82 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 PRKCDQ05655 676 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 CD47Q08722 323 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 RAB39AQ14964 217 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 TAF11Q15544 211 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 EFNB3Q15768 340 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 SLC16A14Q7RTX9 510 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 DPPA2Q7Z7J5 298 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 OAFQ86UD1 273 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 MEX3DQ86XN8 651 aaKnown RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 RNF113BQ8IZP6 322 aaKnown RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 ZNF525Q8N782 197 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 RNF148Q8N7C7 305 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 OR4K5Q8NGD3 323 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 OR51A7Q8NH64 312 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 ACOT11Q8WXI4 607 aaPredicted RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 LRRC37BQ96QE4 947 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 SH3GL3Q99963 347 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 RAB1BQ9H0U4 201 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 TXNIPQ9H3M7 391 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 ZNF224Q9NZL3 707 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 SAMD4AQ9UPU9 718 aaKnown RBP11.95□□□□□ -0.5
PNKP-228ENST00000637325 HIF3AQ9Y2N7 669 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 CMAHPQ9Y471 501 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 ENPP4Q9Y6X5 453 aa11.95□□□□□ -0.5
PNKP-228ENST00000637325 MALRD1Q5VYJ5 2156 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 TRAV27A0A087WT01 109 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 FFAR1O14842 300 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 DCTN3O75935 186 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 ERCC1P07992 297 aaPredicted RBP11.94□□□□□ -0.5
PNKP-228ENST00000637325 TSPAN19P0C672 248 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 NR2C1P13056 603 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 TCN1P20061 433 aaPredicted RBP11.94□□□□□ -0.5
PNKP-228ENST00000637325 MAKP20794 623 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 NR4A1P22736 598 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 PDLIM4P50479 330 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 RPL27P61353 136 aaKnown RBP11.94□□□□□ -0.5
PNKP-228ENST00000637325 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.51e-11■■■■■ 50.1
PNKP-228ENST00000637325 MXRA7P84157 204 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 KRT72Q14CN4 511 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 CARTPTQ16568 116 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 HIST3H3Q16695 136 aa11.94□□□□□ -0.5
PNKP-228ENST00000637325 ARMC4Q5T2S8 1044 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms