RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 MAP1LC3CQ9BXW4 147 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 SRRQ9GZT4 340 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TOLLIPQ9H0E2 274 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 RACGAP1Q9H0H5 632 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 TRIM45Q9H8W5 580 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 SLC40A1Q9NP59 571 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 C8orf4Q9NR00 106 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 STMN3Q9NZ72 180 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MRM2Q9UI43 246 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 MRTO4Q9UKD2 239 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 DIMT1Q9UNQ2 313 aaKnown RBP2.92□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF175Q9Y473 711 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 FADS3Q9Y5Q0 445 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 PEX16Q9Y5Y5 336 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 URGCP-MRPS24S4R325 110 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 NCOA3Q9Y6Q9 1424 aa2.92□□□□□ -1.94
BRCA1-229ENST00000621897 NACADO15069 1562 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CHD4Q14839 1912 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 RPAP1Q9BWH6 1393 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 LOC105371267A0A1B0GV96 52 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 A0A1W2PRD5 423 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CCDC182A6NF36 153 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TRABD2BA6NFA1 517 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 LRRN3E7EW58 273 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 K7ERI5 159 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PRKAB2O43741 272 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 N4BP1O75113 896 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ZMPSTE24O75844 475 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 B3GAT3O94766 335 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 DUSP14O95147 198 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SCELO95171 688 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GJB5O95377 273 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 IFNA6P05013 189 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CD3GP09693 182 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SLC35G4P0C7Q5 338 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GOLGA8HP0CJ92 632 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 MYL2P10916 166 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PSKH1P11801 424 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PGCP20142 388 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 KITLGP21583 273 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TEAD1P28347 426 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CD1CP29017 333 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PRDX3P30048 256 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 P2RY1P47900 373 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 RFX3P48380 749 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SERPINB9P50453 376 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 KRTAP10-1P60331 282 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 OSTNP61366 133 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 RPL10AP62906 217 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PITPNAQ00169 270 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TSPAN31Q12999 210 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ORC2Q13416 577 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 MED21Q13503 144 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 C1orf61Q13536 156 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GRB7Q14451 532 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SLC15A2Q16348 729 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 C5orf64Q2M2E5 130 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 QRICH1Q2TAL8 776 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF699Q32M78 642 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 VPS26BQ4G0F5 336 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 C1orf189Q5VU69 101 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GPR107Q5VW38 600 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CD300LGQ6UXG3 332 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TMPRSS11AQ6ZMR5 421 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PRSS48Q7RTY5 328 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 P4HA3Q7Z4N8 544 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ANKRD37Q7Z713 158 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ACOT1Q86TX2 421 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GPBP1Q86WP2 473 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SLC13A5Q86YT5 568 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 APRG1Q8IVJ8 170 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CEND1Q8N111 149 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SYS1Q8N2H4 156 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 LRRC75AQ8NAA5 344 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 SDR9C7Q8NEX9 313 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 OR4A4PQ8NGN8 299 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 OR5M1Q8NGP8 315 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 OR1L6Q8NGR2 347 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 FBXO25Q8TCJ0 367 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CPNE4Q96A23 557 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CAPNS2Q96L46 248 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 C12orf42Q96LP6 360 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GBA3Q9H227 469 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 RHOJQ9H4E5 214 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ANKRD19PQ9H560 264 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 WDR54Q9H977 334 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 MRPL40Q9NQ50 206 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 STARD5Q9NSY2 213 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 GPATCH2LQ9NWQ4 482 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 C1orf123Q9NWV4 160 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TAS2R7Q9NYW3 318 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 CD274Q9NZQ7 290 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 ZNF282Q9UDV7 671 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 KIF25Q9UIL4 384 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 PRPF19Q9UMS4 504 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 KLHDC2Q9Y2U9 406 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 MEMO1Q9Y316 297 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 TIMM10BQ9Y5J6 103 aa2.91□□□□□ -1.94
BRCA1-229ENST00000621897 USP42Q9H9J4 1324 aaKnown RBP2.91□□□□□ -1.94
BRCA1-229ENST00000621897 AQRO60306 1485 aaKnown RBP eCLIP2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms