RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MED31Q9Y3C7 131 aa14.81□□□□□ -0.04
HMGN3-203ENST00000620514 YLPM1P49750 1951 aaKnown RBP14.81□□□□□ -0.04
HMGN3-203ENST00000620514 A0A1W2PRG6 482 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 VSTM5A8MXK1 200 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MCIDASD6RGH6 385 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 TRMUO75648 421 aaKnown RBP14.8□□□□□ -0.04
HMGN3-203ENST00000620514 IGHG1P01857 330 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 IGHV4-31P0DP07 118 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 THRBP10828 461 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 NR4A2P43354 598 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 CLRN1P58418 232 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 SELENOWP63302 87 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 LIPEQ05469 1076 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 LAPTM4AQ15012 233 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 HIST3H3Q16695 136 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MEX3DQ86XN8 651 aaKnown RBP14.8□□□□□ -0.04
HMGN3-203ENST00000620514 ZNF584Q8IVC4 421 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 SYT14Q8NB59 555 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 NOXO1Q8NFA2 376 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MCHR2Q969V1 340 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MDFIQ99750 246 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 PIMREGQ9BSJ6 248 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MRPL13Q9BYD1 178 aaKnown RBP14.8□□□□□ -0.04
HMGN3-203ENST00000620514 MRPL37Q9BZE1 423 aaKnown RBP14.8□□□□□ -0.04
HMGN3-203ENST00000620514 RAB1BQ9H0U4 201 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 DYNLRB1Q9NP97 96 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 RHCGQ9UBD6 479 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 CMAHPQ9Y471 501 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 SNX13Q9Y5W8 968 aa14.8□□□□□ -0.04
HMGN3-203ENST00000620514 IGHV4-61A0A0C4DH41 118 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 J3KTA2 159 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 NDUFS8O00217 210 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 NME4O00746 187 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 IGF2P01344 180 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 TSPAN19P0C672 248 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 OR8G3PP0DMU2 310 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 ACADSP16219 412 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 ZNF16P17020 682 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-203ENST00000620514 SLC7A2P52569 658 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 ARPINQ7Z6K5 226 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 HIPK1Q86Z02 1210 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 OR4K5Q8NGD3 323 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 LIPHQ8WWY8 451 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 MRPL24Q96A35 216 aaKnown RBP14.79□□□□□ -0.04
HMGN3-203ENST00000620514 PRRC1Q96M27 445 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 SEPHS2Q99611 448 aa14.79□□□□□ -0.04
HMGN3-203ENST00000620514 DENND2DQ9H6A0 471 aaPredicted RBP14.79□□□□□ -0.04
HMGN3-203ENST00000620514 RTTNQ86VV8 2226 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 LOC390937A0A1W2PQ73 354 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 CXCR6O00574 342 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 CCDC22O60826 627 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 STAMBPO95630 424 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 SERPINA5P05154 406 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 ADRA2AP08913 450 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 IFI30P13284 250 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 GLRXP35754 106 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 ST3GAL3Q11203 375 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 FXNQ16595 210 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 ARMC4Q5T2S8 1044 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 CYB5R2Q6BCY4 276 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 C8orf82Q6P1X6 216 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-203ENST00000620514 LRP11Q86VZ4 500 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 PAQR4Q8N4S7 273 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-203ENST00000620514 SYT3Q9BQG1 590 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 BPESC1Q9GZL8 116 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 TPK1Q9H3S4 243 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 MYOZ1Q9NP98 299 aaPredicted RBP14.78□□□□□ -0.04
HMGN3-203ENST00000620514 MAN2C1Q9NTJ4 1040 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 FZR1Q9UM11 496 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 AP3M1Q9Y2T2 418 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 SPEF1Q9Y4P9 236 aa14.78□□□□□ -0.04
HMGN3-203ENST00000620514 IGKV1D-43A0A0B4J1Z2 117 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 FFAR1O14842 300 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 FARS2O95363 451 aaKnown RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 SLC2A10O95528 541 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 ZNF682O95780 498 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 CCL2P13500 99 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 DAOP14920 347 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 MAKP20794 623 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 GSK3BP49841 420 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 DAP3P51398 398 aaKnown RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 GALK2Q01415 458 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 TOP3AQ13472 1001 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 SLC16A14Q7RTX9 510 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 IGFN1Q86VF2 1251 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 NEU4Q8WWR8 484 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 LZICQ8WZA0 190 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 HDAC2Q92769 488 aaKnown RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 BPIFA2Q96DR5 249 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 KCNK17Q96T54 332 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 HOPXQ9BPY8 73 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 ELAC2Q9BQ52 826 aaKnown RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 RNF121Q9H920 327 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 EFCAB1Q9HAE3 211 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 MYEF2Q9P2K5 600 aaKnown RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 FBXO9Q9UK97 447 aaPredicted RBP14.77□□□□□ -0.05
HMGN3-203ENST00000620514 FBXL3Q9UKT7 428 aa14.77□□□□□ -0.05
HMGN3-203ENST00000620514 LYNX1G3V0Z9 82 aa14.76□□□□□ -0.05
HMGN3-203ENST00000620514 GSTA4O15217 222 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms