RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FRMD6Q96NE9 622 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 THAP7Q9BT49 309 aaPredicted RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 CYSLTR2Q9NS75 346 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 SLCO1C1Q9NYB5 712 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 CPAMD8Q8IZJ3 1885 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 OR6C76A6NM76 312 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 WNT11O96014 354 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 FBXO45P0C2W1 286 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 PTHLHP12272 177 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 NAGAP17050 411 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 CCKBRP32239 447 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 PITPNBP48739 271 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 INSM1Q01101 510 aaPredicted RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 TPRA1Q86W33 373 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 WDFY1Q8IWB7 410 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 OR5AK2Q8NH90 309 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 NXPE2Q96DL1 559 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 CCNL2Q96S94 520 aaPredicted RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 TGIF2Q9GZN2 237 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 RNF121Q9H920 327 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 ZNF281Q9Y2X9 895 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 ZNF879B4DU55 563 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 G3V3Y1 287 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 UPK3AO75631 287 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 IL32P24001 234 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 SLC25A1P53007 311 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 SLC26A5P58743 744 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 RPL27P61353 136 aaKnown RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 ADAM8P78325 824 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 POU3F1Q03052 451 aaPredicted RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 IL10RAQ13651 578 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 SF3B4Q15427 424 aaKnown RBP eCLIP11.18□□□□□ -0.62
CIITA-212ENST00000618207 SGCBQ16585 318 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 OR7E24Q6IFN5 339 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 ZNF544Q6NX49 715 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 GALNT6Q8NCL4 622 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 CAPSLQ8WWF8 208 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 MR1Q95460 341 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 FYTTD1Q96QD9 318 aaKnown RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 TTYH2Q9BSA4 534 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 B9D1Q9UPM9 204 aa11.18□□□□□ -0.62
CIITA-212ENST00000618207 COA3Q9Y2R0 106 aaPredicted RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 COL5A1P20908 1838 aaPredicted RBP11.18□□□□□ -0.62
CIITA-212ENST00000618207 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 UCHL1P09936 223 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 EIF1AXP47813 144 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 CLDN6P56747 220 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ALKBH1Q13686 389 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ISXQ2M1V0 245 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 EEF1A1P5Q5VTE0 462 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 CDC20BQ86Y33 519 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 RFT1Q96AA3 541 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 KIAA1143Q96AT1 154 aaPredicted RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 MRPL48Q96GC5 212 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 KLHL15Q96M94 604 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 DEFB126Q9BYW3 111 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 SEMA4CQ9C0C4 833 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 PPP4R1LQ9P1A2 415 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 MOKQ9UQ07 419 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 RPH3AQ9Y2J0 694 aaPredicted RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 IGLV3-12A0A075B6K2 115 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TRAV6A0A075B6T7 132 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 PLPP3O14495 311 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 EIF1AYO14602 144 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 ADAM10O14672 748 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TOX3O15405 576 aaPredicted RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 FCER2P06734 321 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TACSTD2P09758 323 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 IFNGR1P15260 489 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 CD53P19397 219 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ALOX5APP20292 161 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 NPR2P20594 1047 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 SFTPDP35247 375 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 DGCR2P98153 550 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 GFI1Q99684 422 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ELOVL3Q9HB03 270 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 RANGRFQ9HD47 186 aaPredicted RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 RBFOX1Q9NWB1 397 aaKnown RBP11.17□□□□□ -0.62
CIITA-212ENST00000618207 MYOTQ9UBF9 498 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 ZNF221Q9UK13 617 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 EXPH5Q8NEV8 1989 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 A0A1W2PNR3 127 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 H0YC42 278 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 TXNDC12O95881 172 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 GAAP10253 952 aa11.17□□□□□ -0.62
CIITA-212ENST00000618207 PRKACAP17612 351 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms