RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 MT-ND4LP03901 98 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 OPN1LWP04000 364 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 MSR1P21757 451 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 HBG1P69891 147 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 HBG2P69892 147 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 RARRES3Q9UL19 164 aa17.37■□□□□ 0.37
SPAST-203ENST00000615843 CDC14CA4D256 554 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 H0YGG7 62 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 GNB3P16520 340 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 EPHA5P54756 1037 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PDLIM3Q53GG5 364 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 ZNF385BQ569K4 471 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 ATPAF1Q5TC12 328 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 OTUD1Q5VV17 481 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 OGFOD3Q6PK18 319 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 ZNF578Q96N58 590 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 CSF3RQ99062 836 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PTDSS2Q9BVG9 487 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 SLC46A2Q9BY10 475 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 AUNIPQ9H7T9 357 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 SFXN1Q9H9B4 322 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 FN3KRPQ9HA64 309 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 SLC25A19Q9HC21 320 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 A0A0B4J203 849 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 A0A1B0GTL3 188 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 SUSD5O60279 629 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 CCL5P13501 91 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 LIPNQ5VXI9 398 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 SHEQ5VZ18 495 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 TCTN3Q6NUS6 607 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 CMC2Q9NRP2 79 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PCDHGA5Q9Y5G8 931 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 LOC102725191A0A1B0GVB3 256 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 BLACEA4D250 179 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PHF1O43189 567 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 NME2P1O60361 137 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 CHRM4P08173 479 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 MELKQ14680 651 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 ZNF239Q16600 458 aaKnown RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 CLPPQ16740 277 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPAST-203ENST00000615843 SECTM1Q8WVN6 248 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PIGCQ92535 297 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 GAS2L1Q99501 681 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 HCFC1R1Q9NWW0 138 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 POMT2Q9UKY4 750 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 TO15178 435 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 CYTIPO60759 359 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 PSMB6P28072 239 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 ERV3-1Q14264 604 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 BAGE3Q86Y29 109 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 BAGE2Q86Y30 109 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 ZNF808Q8N4W9 903 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 APH1BQ8WW43 257 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 Q96M85 177 aa17.36■□□□□ 0.37
SPAST-203ENST00000615843 FGF20Q9NP95 211 aaPredicted RBP17.36■□□□□ 0.37
SPAST-203ENST00000615843 DDAH2O95865 285 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ECI1P42126 302 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 OR1D4P47884 311 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 RAB38P57729 211 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 OR13C5Q8NGS8 318 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ELF4Q99607 663 aaPredicted RBP17.35■□□□□ 0.37
SPAST-203ENST00000615843 DCTN6O00399 190 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 SEMA4FO95754 770 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 LINC00346Q8IVM7 164 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ZNF439Q8NDP4 499 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 OR2G3Q8NGZ4 309 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 SFT2D1Q8WV19 159 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 OR52A1Q9UKL2 312 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 MDFIC2A0A1B0GVS7 189 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ANKRD30BLA7E2S9 258 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ACHEP22303 614 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ITGB8P26012 769 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 SGPP1Q9BX95 441 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 JTBO76095 146 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 DPP4P27487 766 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 UBE2NP61088 152 aaKnown RBP17.35■□□□□ 0.37
SPAST-203ENST00000615843 AFMIDQ63HM1 303 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ABHD17CQ6PCB6 329 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ZNF561Q8N587 486 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 TSSK2Q96PF2 358 aa17.35■□□□□ 0.37
SPAST-203ENST00000615843 ACTL6BO94805 426 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 KLKB1P03952 638 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 CTBSQ01459 385 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 TESK1Q15569 626 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 AADACL3Q5VUY0 350 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 BRICD5Q6PL45 260 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 Q6ZRG5 221 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 WDR5BQ86VZ2 330 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 BAP18Q8IXM2 172 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 ANKRD9Q96BM1 317 aaPredicted RBP17.34■□□□□ 0.37
SPAST-203ENST00000615843 CASD1Q96PB1 797 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 CLSTN3Q9BQT9 956 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 TAS2R5Q9NYW4 299 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 TRAV36DV7A0A075B6V5 113 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 ZFP92A6NM28 416 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 SLC6A12P48065 614 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 DPPA2Q7Z7J5 298 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 OR9K2Q8NGE7 335 aa17.34■□□□□ 0.37
SPAST-203ENST00000615843 ADAM19Q9H013 955 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms