RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C1QBP02746 253 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 GP1BBP13224 206 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 DCTDP32321 178 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 FOXK1P85037 733 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 MFGE8Q08431 387 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 C19orf57Q0VDD7 668 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 BIKQ13323 160 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 MAB21L1Q13394 359 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 COL28A1Q2UY09 1125 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 Q499Y3 187 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 YOD1Q5VVQ6 348 aaPredicted RBP12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR7E24Q6IFN5 339 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 STT3BQ8TCJ2 826 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 DAZLQ92904 295 aaKnown RBP12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 SCMH1Q96GD3 660 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR10A4Q9H209 315 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 NUDT21O43809 227 aaKnown RBP12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 PTH2RP49190 550 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 SHBQ15464 509 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 PRR23CQ6ZRP0 262 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 SMIM4Q8WVI0 70 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 MED11Q9P086 117 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 SDK2Q58EX2 2172 aa12.7□□□□□ -0.38
PCDHGA3-202ENST00000612467 TRAV36DV7A0A075B6V5 113 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 XKRYO14609 159 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 ZNF780AO75290 641 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 TXNDC12O95881 172 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 ASPHD2Q6ICH7 369 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR5M1Q8NGP8 315 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 WDR89Q96FK6 387 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC41A2Q96JW4 573 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR51J1Q9H342 316 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 FBXL3Q9UKT7 428 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 FOXJ3Q9UPW0 622 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 FKBP7Q9Y680 259 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 LOC101059948A0A1B0GTJ6 334 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 SOX1O00570 391 aaPredicted RBP12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 FADS1O60427 444 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 ITGA10O75578 1167 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 TOXO94900 526 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 DHFRP00374 187 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 GLB1P16278 677 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 VEGFCP49767 419 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 RNF4P78317 190 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 FAM209AQ5JX71 171 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 C1orf140Q5VVS0 124 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 LCN10Q6JVE6 187 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 GUSBP11Q6P575 273 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 LINC00346Q8IVM7 164 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 MSANTD3Q96H12 275 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 KLHL15Q96M94 604 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 RAB33BQ9H082 229 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 HRASLSQ9HDD0 168 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 MRTO4Q9UKD2 239 aaKnown RBP12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
PCDHGA3-202ENST00000612467 H3BML4 177 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 KDM4BO94953 1096 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 TACSTD2P09758 323 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 APEHP13798 732 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 PGCP20142 388 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ERP29P30040 261 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CCKBRP32239 447 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 HTR2BP41595 481 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 CCR9P51686 369 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 EPHA4P54764 986 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 GUCA2AQ02747 115 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 HSF2Q03933 536 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 SNTA1Q13424 505 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 GSG1Q2KHT4 349 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 Q6ZTK2 550 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 OR51D1Q8NGF3 324 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 TSEN15Q8WW01 171 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 APMAPQ9HDC9 416 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 MED29Q9NX70 200 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 TAS2R10Q9NYW0 307 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 COA3Q9Y2R0 106 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 PRSS37A4D1T9 235 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 LMX1BO60663 402 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 KHDRBS3O75525 346 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 AFF3P51826 1226 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 BTG1P62324 171 aa12.68□□□□□ -0.38
PCDHGA3-202ENST00000612467 ADAM8P78325 824 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms