RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 AQP8O94778 261 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 APOL3O95236 402 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PLGP00747 810 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 HLA-DPB1P04440 258 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TACSTD2P09758 323 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 HLA-DOBP13765 273 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ENPP1P22413 925 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PCSK6P29122 969 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TGM4P49221 684 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SUCLG1P53597 346 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PLGLB1Q02325 96 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 C19orf57Q0VDD7 668 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 AQP6Q13520 282 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SLC17A1Q14916 467 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 WIPI1Q5MNZ9 446 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF684Q5T5D7 378 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 HBMQ6B0K9 141 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RHOUQ7L0Q8 258 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 YRDCQ86U90 279 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TMEM251Q8N6I4 163 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 FDCSPQ8NFU4 85 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RPS4Y2Q8TD47 263 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GATAD2BQ8WXI9 593 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZDHHC11Q9H8X9 412 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PLA2G3Q9NZ20 509 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CCDC59Q9P031 241 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SSR3Q9UNL2 185 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SF3B6Q9Y3B4 125 aaKnown RBP10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ALPK2Q86TB3 2170 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MED12Q93074 2177 aa10.97□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DNAJC13O75165 2243 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TRDV1A0A1B0GX56 115 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 A0A1W2PPW3 197 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 NPIPA2E9PIF3 369 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 NPIPA3F8WFD2 350 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DCTN6O00399 190 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OGG1O15527 345 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SLC16A7O60669 478 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MRPL3P09001 348 aaKnown RBP10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CTLA4P16410 223 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNF708P17019 499 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 PYCR1P32322 319 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CRYBB2P43320 205 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SERPINB10P48595 397 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 LHX2P50458 406 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 GBX2P52951 348 aaPredicted RBP10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 BIDP55957 195 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CARD18P57730 90 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 RPS3AP61247 264 aaKnown RBP10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 FOXC1Q12948 553 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MELKQ14680 651 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 STK11Q15831 433 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 INAQ16352 499 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KCNMB1Q16558 191 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 LIPKQ5VXJ0 399 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 CREB3L2Q70SY1 520 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 TRILQ7L0X0 811 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MS4A15Q8N5U1 240 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MEIOBQ8N635 442 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SLC26A10Q8NG04 563 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OR9K2Q8NGE7 335 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 OTOSQ8NHW6 89 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 DYNC2LI1Q8TCX1 351 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZNRF4Q8WWF5 429 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 MED18Q9BUE0 208 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 KCNN2Q9H2S1 579 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 SRA1Q9HD15 236 aaKnown RBP10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 ZMIZ1Q9ULJ6 1067 aa10.96□□□□□ -0.65
NEDD8-MDP1-203ENST00000604306 IGKV3D-15A0A087WSY6 115 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 A6NL46 340 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ZNF726A6NNF4 738 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 H7C1C5 153 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 EIF1AYO14602 144 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 TNFSF11O14788 317 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SMAD9O15198 467 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 GPRIN2O60269 458 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SELENOFO60613 162 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CYTIPO60759 359 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 IGHG3P01860 377 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ALOX5APP20292 161 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 EIF2S3P41091 472 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 NAA10P41227 235 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CD97P48960 835 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ENTPD1P49961 510 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CCL11P51671 97 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CLDN18P56856 261 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CLRN1P58418 232 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 LCN6P62502 163 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 PPIAP62937 165 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ROM1Q03395 351 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SRSF6Q13247 344 aaKnown RBP10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 DOC2BQ14184 412 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SLC10A1Q14973 349 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SPCS2Q15005 226 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 DGUOKQ16854 277 aa10.95□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 DEFB109BQ30KR1 87 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms