RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 INIPQ9NRY2 104 aa12□□□□□ -0.49
APOC1-208ENST00000592535 MAN2C1Q9NTJ4 1040 aa12□□□□□ -0.49
APOC1-208ENST00000592535 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
APOC1-208ENST00000592535 FKBP7Q9Y680 259 aa12□□□□□ -0.49
APOC1-208ENST00000592535 hCG_2039718K7EN88 272 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 FFAR1O14842 300 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 CD5LO43866 347 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 TRMUO75648 421 aaKnown RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 TP53P04637 393 aaPredicted RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 IFNW1P05000 195 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 CSF3P09919 207 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 OR8G3PP0DMU2 310 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 IFI30P13284 250 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 ZNF35P13682 527 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 SLC25A16P16260 332 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 NCK1P16333 377 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 IFNA8P32881 189 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 PPOXP50336 477 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 DAP3P51398 398 aaKnown RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 RAB39AQ14964 217 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 LAPTM4AQ15012 233 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 HIST3H3Q16695 136 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 MSMPQ1L6U9 139 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 IFI44LQ53G44 452 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 MEX3DQ86XN8 651 aaKnown RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 OFCC1Q8IZS5 231 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 SYT14Q8NB59 555 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 GEMIN6Q8WXD5 167 aaKnown RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 MCHR2Q969V1 340 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 HSH2DQ96JZ2 352 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 SEPHS2Q99611 448 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 DOK1Q99704 481 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 SH3GL3Q99963 347 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 MRPL13Q9BYD1 178 aaKnown RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 DENND2DQ9H6A0 471 aaPredicted RBP11.99□□□□□ -0.49
APOC1-208ENST00000592535 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
APOC1-208ENST00000592535 TMEM129A0AVI4 362 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 VSTM5A8MXK1 200 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 SNX3O60493 162 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 SERPINA1P01009 418 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 ACADSP16219 412 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 MAKP20794 623 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 DRD4P21917 467 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 NR4A1P22736 598 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 PDLIM4P50479 330 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 PSME3P61289 254 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 LOXL1Q08397 574 aaPredicted RBP11.98□□□□□ -0.49
APOC1-208ENST00000592535 ARMC4Q5T2S8 1044 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 FKBP9P1Q75LS8 142 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 PRIMA1Q86XR5 153 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 ZNF584Q8IVC4 421 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 NRMQ8IXM6 262 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 CDK20Q8IZL9 346 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 RBM15BQ8NDT2 890 aaKnown RBP11.98□□□□□ -0.49
APOC1-208ENST00000592535 OR4K5Q8NGD3 323 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 HDAC2Q92769 488 aaKnown RBP11.98□□□□□ -0.49
APOC1-208ENST00000592535 FAM162AQ96A26 154 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 BPIFA2Q96DR5 249 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 CMTM5Q96DZ9 223 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 KCTD14Q9BQ13 255 aaPredicted RBP11.98□□□□□ -0.49
APOC1-208ENST00000592535 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 ABCD2Q9UBJ2 740 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 HIF3AQ9Y2N7 669 aa11.98□□□□□ -0.49
APOC1-208ENST00000592535 SONP18583 2426 aaKnown RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 SH3PXD2BA1X283 911 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 CENPBD1B2RD01 187 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 VWC2LB2RUY7 222 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 NDUFAB1O14561 156 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 PRSS23O95084 383 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 FARS2O95363 451 aaKnown RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 SLC2A10O95528 541 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 IGFBP1P08833 259 aaPredicted RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 PRDX6P30041 224 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 LSP1P33241 339 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 ZNF84P51523 738 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 ZNF133P52736 654 aaPredicted RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 PRKCDQ05655 676 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 FMODQ06828 376 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 TOP3AQ13472 1001 aaPredicted RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 TRAM2Q15035 370 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 TMEM249Q2WGJ8 235 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 ALG10Q5BKT4 473 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 HDDC2Q7Z4H3 204 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 IGFN1Q86VF2 1251 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 ZCCHC24Q8N2G6 241 aaKnown RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 NMD3Q96D46 503 aaKnown RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 TNFRSF13CQ96RJ3 184 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 NSRP1Q9H0G5 558 aaKnown RBP11.97□□□□□ -0.49
APOC1-208ENST00000592535 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 TXNIPQ9H3M7 391 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 RNF121Q9H920 327 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 FBXL3Q9UKT7 428 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 CMAHPQ9Y471 501 aa11.97□□□□□ -0.49
APOC1-208ENST00000592535 TRAV27A0A087WT01 109 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 A0A087WUU8 490 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 IGKV1D-43A0A0B4J1Z2 117 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 HTR3EA5X5Y0 456 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 NPIPB13A6NJU9 1138 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms