RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SEC14L2O76054 403 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 GASTP01350 101 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 PAX7P23759 505 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 SLC6A6P31641 620 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF84P51523 738 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 RPS6KA3P51812 740 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 FXYD6P3P58550 94 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 KRTAP10-9P60411 292 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 RFX4Q33E94 735 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 GPR139Q6DWJ6 353 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 RPL13AP3Q6NVV1 102 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 LRFN4Q6PJG9 635 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 SEZ6L2Q6UXD5 910 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 YTHDF3Q7Z739 585 aaKnown RBP18.65■□□□□ 0.58
ATG4D-212ENST00000590096 ZNF519Q8TB69 540 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 FNDC8Q8TC99 324 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 MCHR2Q969V1 340 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 LURAP1Q96LR2 239 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 RAB3IPQ96QF0 476 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-212ENST00000590096 RBP7Q96R05 134 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 KCNK17Q96T54 332 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 NELFAQ9H3P2 528 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 NRIP3Q9NQ35 241 aa18.65■□□□□ 0.58
ATG4D-212ENST00000590096 ARPC4-TTLL3A0A0A6YYG9 625 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ARHGEF9O43307 516 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ENTPD5O75356 428 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 GSTM3P21266 225 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 SDHAP31040 664 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 CAPZA2P47755 286 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF83P51522 516 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ARHGDIAP52565 204 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 IST1P53990 364 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 NCMAPQ5T1S8 102 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF620Q6ZNG0 422 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 FAM122BQ7Z309 247 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 CCDC36Q8IYA8 594 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 OR52L1Q8NGH7 329 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 GTPBP3Q969Y2 492 aaKnown RBP18.64■□□□□ 0.57
ATG4D-212ENST00000590096 Q96M85 177 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 DGCR6LQ9BY27 220 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 ARMC1Q9NVT9 282 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 NPAP1Q9NZP6 1156 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 PDP1Q9P0J1 537 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-212ENST00000590096 AP4S1Q9Y587 144 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 IER3IP1Q9Y5U9 82 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 CDH10Q9Y6N8 788 aa18.64■□□□□ 0.57
ATG4D-212ENST00000590096 TEX13CA0A0J9YWL9 993 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 ARRDC5A6NEK1 342 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 M0R1B8 84 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 CD3EP07766 207 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 FCGR1AP12314 374 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 B4GALT1P15291 398 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 BSPH1Q075Z2 132 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 KRR1Q13601 381 aaKnown RBP18.63■□□□□ 0.57
ATG4D-212ENST00000590096 THEM4Q5T1C6 240 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 C10orf128Q5T292 105 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 TMEM108Q6UXF1 575 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF627Q7L945 461 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 NANOS1Q8WY41 292 aaKnown RBP18.63■□□□□ 0.57
ATG4D-212ENST00000590096 RASD2Q96D21 266 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 DUS3LQ96G46 650 aaKnown RBP18.63■□□□□ 0.57
ATG4D-212ENST00000590096 SAMD8Q96LT4 415 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 HS3ST6Q96QI5 342 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 IFT27Q9BW83 186 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 C1QTNF6Q9BXI9 259 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 SMURF2Q9HAU4 748 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 MOV10Q9HCE1 1003 aaKnown RBP18.63■□□□□ 0.57
ATG4D-212ENST00000590096 APCP25054 2843 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 FBN2P35556 2912 aa18.63■□□□□ 0.57
ATG4D-212ENST00000590096 SLC2A10O95528 541 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 PPP1R3DO95685 299 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 APEHP13798 732 aaKnown RBP18.62■□□□□ 0.57
ATG4D-212ENST00000590096 FASP25445 335 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 LOXP28300 417 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF133P52736 654 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-212ENST00000590096 ACTR3P61158 418 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 TUBA1BP68363 451 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 TUBA4AP68366 448 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 FMODQ06828 376 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 MESTQ5EB52 335 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 RASSF6Q6ZTQ3 369 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 TUBA1AQ71U36 451 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 TMEM179BQ7Z7N9 219 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 ERMAPQ96PL5 475 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-212ENST00000590096 FEVQ99581 238 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 TMEM38BQ9NVV0 291 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 RNF115Q9Y4L5 304 aa18.62■□□□□ 0.57
ATG4D-212ENST00000590096 DPRXA6NFQ7 191 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 H7C1C5 153 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 SOCS2O14508 198 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 AHCYL1O43865 530 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 FARS2O95363 451 aaKnown RBP18.61■□□□□ 0.57
ATG4D-212ENST00000590096 PTAFRP25105 342 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 NOS3P29474 1203 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 LCN6P62502 163 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 GABPB1Q06547 395 aaPredicted RBP18.61■□□□□ 0.57
ATG4D-212ENST00000590096 KPNB1Q14974 876 aaKnown RBP18.61■□□□□ 0.57
ATG4D-212ENST00000590096 ATP6AP1Q15904 470 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 ADCK1Q86TW2 530 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 CLDN22Q8N7P3 220 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms