RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCDC163A0A0D9SF12 145 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 GPR171O14626 319 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 S100A1P23297 94 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 SOX2P48431 317 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ART1P52961 327 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 SNTB2Q13425 540 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC17A1Q14916 467 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ESPNLQ6ZVH7 1005 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 LINGO2Q7L985 606 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 KANSL1Q7Z3B3 1105 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF679Q8IYX0 411 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF454Q8N9F8 522 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 CEP76Q8TAP6 659 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 TTC9Q92623 222 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 C4orf45Q96LM5 186 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ZNF587Q96SQ5 575 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 MED28Q9H204 178 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 ELOVL3Q9HB03 270 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 GALNT9Q9HCQ5 603 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 NUDT15Q9NV35 164 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 MCUBQ9NWR8 336 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 KCNG2Q9UJ96 466 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 EXPH5Q8NEV8 1989 aa17.28■□□□□ 0.36
PRKCSH-209ENST00000589838 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 IGLV1-36A0A0B4J1U3 117 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 SLC22A23A1A5C7 686 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 C7orf66A4D0T2 115 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 ANXA2P2A6NMY6 339 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 GABARAPH6UMI1 98 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 ONECUT2O95948 504 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 ANXA2P07355 339 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 MAGEB1P43366 347 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 MAP2K6P52564 334 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 DLX5P56178 289 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 CCL7P80098 99 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 KLF9Q13886 244 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 RNASE12Q5GAN4 147 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 GUSBP11Q6P575 273 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 PAPD4Q6PIY7 484 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 DNM1P34Q6PK57 102 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 TMPRSS9Q7Z410 1059 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 LRRTM1Q86UE6 522 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 UBALD2Q8IYN6 164 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 MFSD8Q8NHS3 518 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 HGDQ93099 445 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 MIB2Q96AX9 1013 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 NXPE2Q96DL1 559 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 DNAJA3Q96EY1 480 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 OR2M2Q96R28 347 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 TMEM246Q9BRR3 403 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 OR11A1Q9GZK7 315 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 STMN3Q9NZ72 180 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 KLHL9Q9P2J3 617 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 DNAH14Q0VDD8 3507 aa17.27■□□□□ 0.36
PRKCSH-209ENST00000589838 NAP1L6A6NFF2 107 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 ADAM10O14672 748 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 GIFP27352 417 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 MSX1P28360 303 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 GDNFP39905 211 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 MNDAP41218 407 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 GZMKP49863 264 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 FBXW4P57775 412 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 INSM1Q01101 510 aaPredicted RBP17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 FAPQ12884 760 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 BCL2L15Q5TBC7 163 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 PWWP2BQ6NUJ5 590 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 UTS2BQ765I0 119 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 ZNF227Q86WZ6 799 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 DND1Q8IYX4 353 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 SYNPRQ8TBG9 265 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 RNF128Q8TEB7 428 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 FCAMRQ8WWV6 532 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 DDIT4LQ96D03 193 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 SLC25A38Q96DW6 304 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 SCMH1Q96GD3 660 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 OR5V1Q9UGF6 321 aa17.27■□□□□ 0.35
PRKCSH-209ENST00000589838 CPAMD8Q8IZJ3 1885 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 TRAV6A0A075B6T7 132 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 A0A0A6YYJ9 748 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 TRBV11-1A0A0K0K1C0 115 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 FTCDNL1E5RQL4 147 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 SOX1O00570 391 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 ZNF208O43345 1280 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 KRT33AO76009 404 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 LDOC1O95751 146 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 HOXA6P31267 233 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 RCVRNP35243 200 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 ROM1Q03395 351 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 GLO1Q04760 184 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 PUDPQ08623 228 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 MEP1BQ16820 701 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 FAM205BPQ63HN1 556 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 MAMSTRQ6ZN01 415 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 BTN2A1Q7KYR7 527 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 PRSS45Q7RTY3 260 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 PLCZ1Q86YW0 608 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 PRSS35Q8N3Z0 413 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 SLC38A9Q8NBW4 561 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 HAVCR1Q96D42 359 aa17.26■□□□□ 0.35
PRKCSH-209ENST00000589838 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms