RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 DCTN3O75935 186 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 BCL10O95999 233 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 IGHG1P01857 330 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 TFP02787 698 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 ACHEP22303 614 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 ARFIP2P53365 341 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 RIN1Q13671 783 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF74Q16587 644 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 METTL21CQ5VZV1 264 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 DLEU7Q6UYE1 221 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 LINC00114Q6XXX2 140 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 NANOGNBQ7Z5D8 188 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 MYPOPQ86VE0 399 aaPredicted RBP16.04■□□□□ 0.16
LINC01238-205ENST00000567549 GLCCI1Q86VQ1 547 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 TXNDC15Q96J42 360 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 SNX18Q96RF0 628 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 IKZF5Q9H5V7 419 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 RNF121Q9H920 327 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 CDH20Q9HBT6 801 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 IQCMA0A1B0GVH7 501 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 A0A1W2PRG6 482 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 MCIDASD6RGH6 385 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 M0R3H8 397 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TCF21O43680 179 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 IFNA8P32881 189 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 PCGF2P35227 344 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 RAD52P43351 418 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 GPR6P46095 362 aaPredicted RBP16.03■□□□□ 0.16
LINC01238-205ENST00000567549 DVL1P1P54792 670 aaPredicted RBP16.03■□□□□ 0.16
LINC01238-205ENST00000567549 CDH15P55291 814 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TMEM33P57088 247 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 CLRN1P58418 232 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TEKQ02763 1124 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 CYLC2Q14093 348 aaPredicted RBP16.03■□□□□ 0.16
LINC01238-205ENST00000567549 NKPD1Q17RQ9 610 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TBC1D28Q2M2D7 210 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 PHYHD1Q5SRE7 291 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 RGS7BPQ6MZT1 257 aaPredicted RBP16.03■□□□□ 0.16
LINC01238-205ENST00000567549 COMTD1Q86VU5 262 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 SLC22A24Q8N4F4 322 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 C10orf82Q8WW14 230 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TMEM54Q969K7 222 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 C19orf24Q9BVV8 132 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 MRPL37Q9BZE1 423 aaKnown RBP16.03■□□□□ 0.16
LINC01238-205ENST00000567549 BCL2L14Q9BZR8 327 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 PCDHAC1Q9H158 963 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 TPK1Q9H3S4 243 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 BAG5Q9UL15 447 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 SLC7A7Q9UM01 511 aa16.03■□□□□ 0.16
LINC01238-205ENST00000567549 LRP5LA4QPB2 252 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF503-AS2A6NEH8 195 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 DHHO43323 396 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 LILRA1O75019 489 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 CH25HO95992 272 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 ANPEPP15144 967 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 DAP3P51398 398 aaKnown RBP16.02■□□□□ 0.16
LINC01238-205ENST00000567549 DUSP7Q16829 419 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 PCGF3Q3KNV8 242 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 TRPM8Q7Z2W7 1104 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 PTOV1Q86YD1 416 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 C10orf111Q8N326 155 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 OR6T1Q8NGN1 323 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 VANGL1Q8TAA9 524 aaPredicted RBP16.02■□□□□ 0.16
LINC01238-205ENST00000567549 MS4A3Q96HJ5 214 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 KAT8Q9H7Z6 458 aaKnown RBP16.02■□□□□ 0.16
LINC01238-205ENST00000567549 TMEM38BQ9NVV0 291 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 DUSP13Q9UII6 198 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 GRIP1Q9Y3R0 1128 aa16.02■□□□□ 0.16
LINC01238-205ENST00000567549 HTR3EA5X5Y0 456 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 HAX1O00165 279 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 TPST2O60704 377 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 IGF2P01344 180 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 RBM34P42696 430 aaKnown RBP16.01■□□□□ 0.15
LINC01238-205ENST00000567549 KLF3P57682 345 aaPredicted RBP16.01■□□□□ 0.15
LINC01238-205ENST00000567549 MTPNP58546 118 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 RAB39AQ14964 217 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 FXNQ16595 210 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 KRTAP24-1Q3LI83 254 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 TMEM154Q6P9G4 183 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 CCDC121Q6ZUS5 278 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 SLC16A14Q7RTX9 510 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 C1orf174Q8IYL3 243 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 ZCCHC24Q8N2G6 241 aaKnown RBP16.01■□□□□ 0.15
LINC01238-205ENST00000567549 SLC30A7Q8NEW0 376 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 C11orf40Q8WZ69 217 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 C1orf159Q96HA4 380 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 SYT3Q9BQG1 590 aa16.01■□□□□ 0.15
LINC01238-205ENST00000567549 ANK3Q12955 4377 aaKnown RBP16■□□□□ 0.15
LINC01238-205ENST00000567549 A0A0A6YYJ9 748 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 A0A0G2JND7 137 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 SNAP29O95721 258 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 NPPAP01160 153 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 OPN1SWP03999 348 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 SAGP10523 405 aaPredicted RBP16■□□□□ 0.15
LINC01238-205ENST00000567549 SF3A3Q12874 501 aaKnown RBP eCLIP16■□□□□ 0.15
LINC01238-205ENST00000567549 VMACQ2NL98 169 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 ERICH5Q6P6B1 374 aa16■□□□□ 0.15
LINC01238-205ENST00000567549 SHQ1Q6PI26 577 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms