RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 OR4S2Q8NH73 311 aa1□□□□□ -2.25
CDH1-211ENST00000567320 SHC3Q92529 594 aa1□□□□□ -2.25
CDH1-211ENST00000567320 MED8Q96G25 268 aa1□□□□□ -2.25
CDH1-211ENST00000567320 C7orf34Q96L11 122 aa1□□□□□ -2.25
CDH1-211ENST00000567320 OXGR1Q96P68 337 aa1□□□□□ -2.25
CDH1-211ENST00000567320 DHX35Q9H5Z1 703 aaKnown RBP1□□□□□ -2.25
CDH1-211ENST00000567320 UBE2ZQ9H832 354 aaPredicted RBP1□□□□□ -2.25
CDH1-211ENST00000567320 NHEJ1Q9H9Q4 299 aaPredicted RBP1□□□□□ -2.25
CDH1-211ENST00000567320 LAMP5Q9UJQ1 280 aa1□□□□□ -2.25
CDH1-211ENST00000567320 SCN1AP35498 2009 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 NCAPD2Q15021 1401 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 SPAG9O60271 1321 aaKnown RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 HIDE1A8MVS5 230 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 ZSCAN12O43309 604 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 MGRN1O60291 552 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 UPK3AO75631 287 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 YIF1AO95070 293 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 CD74P04233 296 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 CAPN1P07384 714 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 ZNF735P0CB33 412 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 NT5EP21589 574 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 DTYMKP23919 212 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 CASP14P31944 242 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 CEACAM6P40199 344 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 YBEYP58557 167 aaPredicted RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 NCBP1Q09161 790 aaKnown RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 FUT5Q11128 374 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 OR5I1Q13606 314 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 IHHQ14623 411 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 DUSP7Q16829 419 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 RBM43Q6ZSC3 357 aaKnown RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 OR52H1Q8NGJ2 320 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 CIRBP-AS1Q8TBR5 109 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 FAM3CQ92520 227 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 SLC25A46Q96AG3 418 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 TMEM159Q96B96 161 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 ZNF317Q96PQ6 595 aaPredicted RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 TMEM59Q9BXS4 323 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 MRPL13Q9BYD1 178 aaKnown RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 MRPL37Q9BZE1 423 aaKnown RBP0.99□□□□□ -2.25
CDH1-211ENST00000567320 MEAF6Q9HAF1 191 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 LY9Q9HBG7 655 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 PALMDQ9NP74 551 aa0.99□□□□□ -2.25
CDH1-211ENST00000567320 ZNF716A6NP11 495 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 SPECC1L-ADORA2AF8WAN1 911 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 BPY2O14599 106 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 TOM1O60784 492 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 GCM2O75603 506 aaPredicted RBP0.98□□□□□ -2.25
CDH1-211ENST00000567320 NEBLO76041 1014 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 TM7SF2O76062 418 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 HLA-DQB1P01920 261 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 ARL14EPLP0DKL9 152 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 MMP11P24347 488 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 TNFRSF9Q07011 255 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 AP1B1Q10567 949 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 OAFQ86UD1 273 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 SLC38A6Q8IZM9 456 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 MSANTD4Q8NCY6 345 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 NOXO1Q8NFA2 376 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 PYROXD1Q8WU10 500 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 SPRYD4Q8WW59 207 aaPredicted RBP0.98□□□□□ -2.25
CDH1-211ENST00000567320 ZNF681Q96N22 645 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 CLCC1Q96S66 551 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 SECISBP2Q96T21 854 aaKnown RBP0.98□□□□□ -2.25
CDH1-211ENST00000567320 PARP12Q9H0J9 701 aaKnown RBP0.98□□□□□ -2.25
CDH1-211ENST00000567320 ADAP2Q9NPF8 381 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 PARP11Q9NR21 331 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 UVRAGQ9P2Y5 699 aa0.98□□□□□ -2.25
CDH1-211ENST00000567320 MRPS18BQ9Y676 258 aaKnown RBP0.98□□□□□ -2.25
CDH1-211ENST00000567320 IGLV3-22A0A075B6J6 115 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CENPVL3A0A0U1RRI6 287 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 TMEM120BA0PK00 339 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 POLR2DO15514 142 aaKnown RBP0.97□□□□□ -2.25
CDH1-211ENST00000567320 LANCL1O43813 399 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 SCGB2A1O75556 95 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 KLHL2O95198 593 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CALM1P0DP23 149 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CALM2P0DP24 149 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CALM3P0DP25 149 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CYP2F1P24903 491 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 DNAJB1P25685 340 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 DMRTC1Q5HYR2 192 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 ADNP2Q6IQ32 1131 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 HDDC2Q7Z4H3 204 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 ADM2Q7Z4H4 148 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 CEP112Q8N8E3 955 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 OR1F12Q8NHA8 337 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 FAM49BQ9NUQ9 324 aa0.97□□□□□ -2.25
CDH1-211ENST00000567320 A0A0U1RQV1 116 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 OR5B21A6NL26 309 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 MED7O43513 233 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 RAB3DO95716 219 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 PTBP3O95758 552 aaKnown RBP0.96□□□□□ -2.26
CDH1-211ENST00000567320 GNA11P29992 359 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 NPBWR2P48146 333 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 KRTAP12-1P59990 96 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 DEFB134Q4QY38 66 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 ARL9Q6T311 187 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 TMEM136Q6ZRR5 245 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 PEX26Q7Z412 305 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms