RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 OSBPL10Q9BXB5 764 aa2.22□□□□□ -2.05
PALB2-203ENST00000565038 KIAA1257Q9ULG3 409 aa2.22□□□□□ -2.05
PALB2-203ENST00000565038 ARHGEF11O15085 1522 aa2.22□□□□□ -2.05
PALB2-203ENST00000565038 TOP2AP11388 1531 aaKnown RBP2.22□□□□□ -2.05
PALB2-203ENST00000565038 ARAP1Q96P48 1450 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 ZNF726A6NNF4 738 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 CLDN9O95484 217 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 IGHV2-5P01817 119 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 FGF1P05230 155 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 PSMC3P17980 439 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 ATP5C1P36542 298 aaKnown RBP2.21□□□□□ -2.06
PALB2-203ENST00000565038 EXOC3L2Q2M3D2 409 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 XKR4Q5GH76 650 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 Q5W150 140 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 ZNF880Q6PDB4 577 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 ZNF493Q6ZR52 646 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 RIMKLAQ8IXN7 391 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 OR2G2Q8NGZ5 317 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 RMI2Q96E14 147 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 HSFY1Q96LI6 401 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 FMO2Q99518 471 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 TMEM43Q9BTV4 400 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 TRIM62Q9BVG3 475 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 RPP21Q9H633 154 aaKnown RBP2.21□□□□□ -2.06
PALB2-203ENST00000565038 NMRAL1Q9HBL8 299 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 ZNF355PQ9NSJ1 428 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 WIF1Q9Y5W5 379 aa2.21□□□□□ -2.06
PALB2-203ENST00000565038 RIMBP3CA6NJZ7 1639 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 RIMBP3BA6NNM3 1639 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 RIMBP3Q9UFD9 1639 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 PLA2R1Q13018 1463 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 SNAPC4Q5SXM2 1469 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 ERCC6L2Q5T890 1561 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 C7orf66A4D0T2 115 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 HIDE1A8MVS5 230 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 GMFGO60234 142 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 SRP72O76094 671 aaKnown RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 RHOBTB1O94844 696 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 GABARAPO95166 117 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 VAMP5O95183 116 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 DBTP11182 482 aaKnown RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 FOLR1P15328 257 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 AK4P27144 223 aaPredicted RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 CDKN1BP46527 198 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 RORCP51449 518 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 SYCNQ0VAF6 134 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 PON3Q15166 354 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 POU2AF1Q16633 256 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 CHRFAM7AQ494W8 412 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 KPRPQ5T749 579 aaPredicted RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 ATAD3BQ5T9A4 648 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 SHISA6Q6ZSJ9 500 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 UBALD2Q8IYN6 164 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 ZNF461Q8TAF7 563 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 PHF10Q8WUB8 498 aaKnown RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 LINC00597Q9H2U6 94 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 C12orf10Q9HB07 376 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 GGA2Q9UJY4 613 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 ISY1Q9ULR0 285 aaKnown RBP2.2□□□□□ -2.06
PALB2-203ENST00000565038 CUX1P39880 1505 aa2.2□□□□□ -2.06
PALB2-203ENST00000565038 CENPJQ9HC77 1338 aaPredicted RBP2.19□□□□□ -2.06
PALB2-203ENST00000565038 A0A1B0GVL5 298 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 BICDL2A1A5D9 508 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 GOLGA8SH3BPF8 625 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 CCL21O00585 134 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 ZNF208O43345 1280 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 FABP3P05413 133 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 TCN2P20062 427 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 CD1CP29017 333 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 RFX3P48380 749 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 MRPL28Q13084 256 aaKnown RBP2.19□□□□□ -2.06
PALB2-203ENST00000565038 ERCC8Q13216 396 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 PRPSAP1Q14558 356 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 ZNF684Q5T5D7 378 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 KDM7AQ6ZMT4 941 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 BIVMQ86UB2 503 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 LHFPL3Q86UP9 236 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 MYOCDQ8IZQ8 938 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 ARRDC1Q8N5I2 433 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 CEP112Q8N8E3 955 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 OR10C1Q96KK4 312 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 PSKH2Q96QS6 385 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 CNN2Q99439 309 aaKnown RBP2.19□□□□□ -2.06
PALB2-203ENST00000565038 TMEM59Q9BXS4 323 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 AZI2Q9H6S1 392 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 NIPAL2Q9H841 368 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 MARCOQ9UEW3 520 aaPredicted RBP2.19□□□□□ -2.06
PALB2-203ENST00000565038 N6AMT1Q9Y5N5 214 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 MRPS18BQ9Y676 258 aaKnown RBP2.19□□□□□ -2.06
PALB2-203ENST00000565038 GRIN2BQ13224 1484 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 GAPVD1Q14C86 1478 aa2.19□□□□□ -2.06
PALB2-203ENST00000565038 CDHR2Q9BYE9 1310 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 PRG4Q92954 1404 aaPredicted RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 GPATCH8Q9UKJ3 1502 aaKnown RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 TARBP1Q13395 1621 aaKnown RBP2.18□□□□□ -2.06
PALB2-203ENST00000565038 TRAV40A0A0B4J280 105 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 H0YCG3 227 aa2.18□□□□□ -2.06
PALB2-203ENST00000565038 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.06
PALB2-203ENST00000565038 TIMM8AO60220 97 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms