RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SKA3Q8IX90 412 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 PCYOX1LQ8NBM8 494 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 PRSS27Q9BQR3 290 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 TMEM120AQ9BXJ8 343 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 TMEM38BQ9NVV0 291 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 ZNF346Q9UL40 294 aaKnown RBP12.93□□□□□ -0.34
SPG7-210ENST00000564409 FBN3Q75N90 2809 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 NPIPB13A6NJU9 1138 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 NPIPB4C9JG80 1138 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 TGFAP01135 160 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 PGA4P0DJD7 388 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 PGA3P0DJD8 388 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 NR2C1P13056 603 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 PCMT1P22061 227 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 IGFBP5P24593 272 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 DAP3P51398 398 aaKnown RBP12.92□□□□□ -0.34
SPG7-210ENST00000564409 ZNF84P51523 738 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 CRYBA2P53672 197 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 TAS2R41P59536 307 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 SELENOVP59797 346 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
SPG7-210ENST00000564409 RIN1Q13671 783 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 HIST3H3Q16695 136 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 SLC36A2Q495M3 483 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 CARM1Q86X55 608 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 LRRC17Q8N6Y2 441 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 OR1J2Q8NGS2 313 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 LIPHQ8WWY8 451 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 MRPL37Q9BZE1 423 aaKnown RBP12.92□□□□□ -0.34
SPG7-210ENST00000564409 LRMDAQ9H2I8 198 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 MEPEQ9NQ76 525 aaPredicted RBP12.92□□□□□ -0.34
SPG7-210ENST00000564409 GID8Q9NWU2 228 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 AP3M1Q9Y2T2 418 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 SH3GLB1Q9Y371 365 aa12.92□□□□□ -0.34
SPG7-210ENST00000564409 ANK3Q12955 4377 aaKnown RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 BLOC1S5-TXNDC5H3BN57 136 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 KPNA4O00629 521 aaPredicted RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 SLC22A2O15244 555 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 PHF1O43189 567 aaPredicted RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 LILRA1O75019 489 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 SNAP29O95721 258 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 IGFBP1P08833 259 aaPredicted RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 QDPRP09417 244 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 IFNA8P32881 189 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 ARFIP2P53365 341 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 CLRN1P58418 232 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 RAB39AQ14964 217 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 RABL3Q5HYI8 236 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 FAM120AOSQ5T036 256 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 TSPYL5Q86VY4 417 aaPredicted RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 C1orf159Q96HA4 380 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 SEPHS2Q99611 448 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 MRPL13Q9BYD1 178 aaKnown RBP12.91□□□□□ -0.34
SPG7-210ENST00000564409 SMURF2Q9HAU4 748 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 RIMS3Q9UJD0 308 aa12.91□□□□□ -0.34
SPG7-210ENST00000564409 STAB1Q9NY15 2570 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 GMNCA6NCL1 334 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 MCIDASD6RGH6 385 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 FXYD1O00168 92 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 MRASO14807 208 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 OR7A10O76100 309 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 TSPAN19P0C672 248 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 ACADSP16219 412 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 FUT1P19526 365 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 ACHEP22303 614 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 ZNF133P52736 654 aaPredicted RBP12.9□□□□□ -0.34
SPG7-210ENST00000564409 TMEM33P57088 247 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 PLP2Q04941 152 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 RPL18Q07020 188 aaKnown RBP12.9□□□□□ -0.34
SPG7-210ENST00000564409 KLF10Q13118 480 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 TAF11Q15544 211 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 MOGQ16653 247 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 SLC16A14Q7RTX9 510 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 LINC01356Q8N9X3 169 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 TMEM239Q8WW34 195 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 RDH5Q92781 318 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 SGTBQ96EQ0 304 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 ZNF583Q96ND8 569 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 KCNN2Q9H2S1 579 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 CHODLQ9H9P2 273 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 INIPQ9NRY2 104 aa12.9□□□□□ -0.34
SPG7-210ENST00000564409 IQCMA0A1B0GVH7 501 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 ZNF250P15622 560 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 APEX1P27695 318 aaKnown RBP12.89□□□□□ -0.35
SPG7-210ENST00000564409 RAD52P43351 418 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 UGT2B15P54855 530 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 MELKQ14680 651 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 TBC1D28Q2M2D7 210 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 RGS7BPQ6MZT1 257 aaPredicted RBP12.89□□□□□ -0.35
SPG7-210ENST00000564409 UNQ6126/PRO20091Q6UXV3 157 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 ZNF584Q8IVC4 421 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms