RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC126Q96EE4 140 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 FAM71F1Q96KD3 344 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 DCLRE1CQ96SD1 692 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF587Q96SQ5 575 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 NAPGQ99747 312 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 MECRQ9BV79 373 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 EMC6Q9BV81 110 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 RAB17Q9H0T7 212 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 TMEM106BQ9NUM4 274 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 ATAD3AQ9NVI7 634 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 RLIMQ9NVW2 624 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 OR5V1Q9UGF6 321 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 POFUT2Q9Y2G5 429 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 LRCH1Q9Y2L9 728 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 UTP11Q9Y3A2 253 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 CHST2Q9Y4C5 530 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 GPR45Q9Y5Y3 372 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 A0A096LPI6 279 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 KIR2DS1A0A191URI9 304 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 CDHR4A6H8M9 788 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 CEACAM18A8MTB9 384 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 TMEM114B3SHH9 223 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 TMEM233B4DJY2 109 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 NPHS1O60500 1241 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 LYPLA1O75608 230 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 TSPAN9O75954 239 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 PRG2P13727 222 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 PRPS1L1P21108 318 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 LSP1P33241 339 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 BPIFB3P59826 476 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 BTG1P62324 171 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 C1DQ13901 141 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 MOGQ16653 247 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 ESCO2Q56NI9 601 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 XKR7Q5GH72 579 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 OR4F3Q6IEY1 312 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 LRRC74BQ6ZQY2 392 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 LDLRAD3Q86YD5 345 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF440Q8IYI8 595 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 CADM2Q8N3J6 435 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 ADPRHL1Q8NDY3 354 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 MZB1Q8WU39 189 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 C10orf82Q8WW14 230 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 SSMEM1Q8WWF3 244 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 RAB40AQ8WXH6 277 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 PHF21AQ96BD5 680 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC47A1Q96FL8 570 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 MARS2Q96GW9 593 aaKnown RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC41A3Q96GZ6 507 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 TXNDC15Q96J42 360 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 C3orf30Q96M34 536 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 C1orf50Q9BV19 199 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 SSBP3Q9BWW4 388 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 BCL2L14Q9BZR8 327 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 CDH20Q9HBT6 801 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 FIS1Q9Y3D6 152 aa6.43□□□□□ -1.38
HERPUD1-206ENST00000563343 RNASET2O00584 256 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 AIM2O14862 343 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 TGDSO95455 350 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 PPP1R3DO95685 299 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 IGHV4-59P01825 116 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 PROCP04070 461 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 DBIP07108 87 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 FGF4P08620 206 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 MYL2P10916 166 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 UQCRBP14927 111 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 IL7RP16871 459 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 DRD4P21917 467 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 GRPRP30550 384 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ARRB2P32121 409 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 IER3P46695 156 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 EGR3Q06889 387 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 DBPQ10586 325 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 CDK5R2Q13319 367 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 HERPUD1Q15011 391 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 C6orf136Q5SQH8 315 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 MBNL2Q5VZF2 373 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ATG16L1Q676U5 607 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 BTNL3Q6UXE8 466 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF836Q6ZNA1 936 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ZCCHC23Q6ZST2 131 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 PIWIL3Q7Z3Z3 882 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 VRK2Q86Y07 508 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 C1orf174Q8IYL3 243 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF101Q8IZC7 436 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 CLIP4Q8N3C7 705 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC22A24Q8N4F4 322 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 FITM2Q8N6M3 262 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 CPEB3Q8NE35 698 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 OR1J1Q8NGS3 322 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 TWIST2Q8WVJ9 160 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 CFHR4Q92496 578 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 TAAR8Q969N4 342 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 TRNT1Q96Q11 434 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 ARHGDIGQ99819 225 aa6.42□□□□□ -1.38
HERPUD1-206ENST00000563343 SH3GL3Q99963 347 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms