RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	LNPEP	Q9UIQ6	1025 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	PITPNC1	Q9UKF7	332 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	RPH3AL	Q9UNE2	315 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	NEU3	Q9UQ49	428 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	PPIAL4A	Q9Y536	164 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431		V9GYQ6	96 aa		3.55	□□□□□ -1.84
LRRC28-222	ENST00000561431	LAMA1	P25391	3075 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	IGLV9-49	A0A0B4J1Y8	123 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	RNF222	A6NCQ9	220 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERI2	A8K979	691 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431		F5H5T6	163 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	KLRC4-KLRK1	H3BQV0	150 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CHEK1	O14757	476 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ARPC2	O15144	300 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ATP6V0E1	O15342	81 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ATP8B1	O43520	1251 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	LAT	O43561	262 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SNX3	O60493	162 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	TSPAN2	O60636	221 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	FADS2	O95864	444 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	TSHB	P01222	138 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	APOE	P02649	317 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SFTPB	P07988	381 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	KRT16	P08779	473 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF806	P0C7X5	589 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PSKH1	P11801	424 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	EFNA1	P20827	205 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MAG	P20916	626 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CA6	P23280	308 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MMP11	P24347	488 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	KRTAP5-9	P26371	169 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CRABP2	P29373	138 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SSTR1	P30872	391 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PTGER4	P35408	488 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CSK	P41240	450 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC1A2	P43004	574 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MAGEA2	P43356	314 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR2B6	P58173	313 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	LINC01547	P58512	204 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	VSNL1	P62760	191 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MRPS25	P82663	173 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CHRNB3	Q05901	458 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PJVK	Q0ZLH3	352 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ILF3	Q12906	894 aa	Known RBP eCLIP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	NME3	Q13232	169 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CDH18	Q13634	790 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	P2RY14	Q15391	338 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYPL1	Q16563	259 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC25A52	Q3SY17	297 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	AGK	Q53H12	422 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	C5orf47	Q569G3	176 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	BRMS1L	Q5PSV4	323 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR5M10	Q6IEU7	315 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	FBXL22	Q6P050	247 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CLEC18B	Q6UXF7	455 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	TRIM69	Q86WT6	500 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERICH1	Q86X53	443 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CACUL1	Q86Y37	369 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PHF13	Q86YI8	300 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MMD2	Q8IY49	270 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	APCDD1	Q8J025	514 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ATP6V0D2	Q8N8Y2	350 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF557	Q8N988	423 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CCDC112	Q8NEF3	446 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR5D18	Q8NGL1	313 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	JOSD2	Q8TAC2	188 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PYDC1	Q8WXC3	89 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	LHX4	Q969G2	390 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CPNE4	Q96A23	557 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	NTAN1	Q96AB6	310 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	AKR1E2	Q96JD6	320 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	APOL2	Q9BQE5	337 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF251	Q9BRH9	671 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	NAT10	Q9H0A0	1025 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	DNAJC4	Q9NNZ3	241 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PRSS16	Q9NQE7	514 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	GSN-AS1	Q9NRJ2	163 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ACOXL	Q9NUZ1	547 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	FLRT3	Q9NZU0	649 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	IFNK	Q9P0W0	207 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ABCD2	Q9UBJ2	740 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	PILRB	Q9UKJ0	227 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SPATA2	Q9UM82	520 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	STUB1	Q9UNE7	303 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	EIF3L	Q9Y262	564 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERGIC3	Q9Y282	383 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	WDR83OS	Q9Y284	106 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	EXOG	Q9Y2C4	368 aa	Known RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR51B4	Q9Y5P0	310 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	SNX10	Q9Y5X0	201 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	MYOF	Q9NZM1	2061 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	EP300	Q09472	2414 aa	Predicted RBP	3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	CEP250	Q9BV73	2442 aa		3.54	□□□□□ -1.84
LRRC28-222	ENST00000561431	RIF1	Q5UIP0	2472 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	IGLV3-10	A0A075B6K4	115 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431		A0A1B0GW15	77 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FABP12	A6NFH5	140 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PMS2P5	A8MQ11	134 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 10 ms