RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SLCO4A1Q96BD0 722 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 FOXB1Q99853 325 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 ESRP2Q9H6T0 727 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 REEP1Q9H902 201 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 NRIP3Q9NQ35 241 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 ADAM18Q9Y3Q7 739 aa13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 TEP1Q99973 2627 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-219ENST00000560871 DHHO43323 396 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 FKBP6O75344 327 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 HOXB1P14653 301 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 CD53P19397 219 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 IFNGR2P38484 337 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 CLRN1P58418 232 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 TSPAN31Q12999 210 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 GK3PQ14409 553 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 DEFB113Q30KQ7 82 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 MESTQ5EB52 335 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 C10orf128Q5T292 105 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ZNF704Q6ZNC4 412 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ZNF620Q6ZNG0 422 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 LINC00471Q8N535 108 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 FANK1Q8TC84 345 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 GNPDA2Q8TDQ7 276 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ALG12Q9BV10 488 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 OR52D1Q9H346 318 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ZNF224Q9NZL3 707 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 CRNNQ9UBG3 495 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 U3KQV3 271 aa13.53□□□□□ -0.24
RABGGTA-219ENST00000560871 ABCA4P78363 2273 aa13.52□□□□□ -0.24
RABGGTA-219ENST00000560871 AKAP6Q13023 2319 aa13.52□□□□□ -0.24
RABGGTA-219ENST00000560871 IGKV1D-43A0A0B4J1Z2 117 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 EBAG9O00559 213 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 CCNB2O95067 398 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 WNT11O96014 354 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 CST1P01037 141 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 QDPRP09417 244 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 B4GALT1P15291 398 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ACVR1BP36896 505 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF83P51522 516 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ERVK-25P63136 954 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 TUBA1BP68363 451 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 TUBA4AP68366 448 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 MYBPC1Q00872 1141 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 FMODQ06828 376 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 SPOCK1Q08629 439 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 MICAQ29983 383 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 SMARCD3Q6STE5 483 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 TUBA1AQ71U36 451 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 CLDN22Q8N7P3 220 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 SYT14Q8NB59 555 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 LILRB1Q8NHL6 650 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 Q96M85 177 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF570Q96NI8 536 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 NDEL1Q9GZM8 345 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 SMURF2Q9HAU4 748 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 TMEM38BQ9NVV0 291 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 POFUT2Q9Y2G5 429 aa13.52□□□□□ -0.25
RABGGTA-219ENST00000560871 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 A6NIZ1 184 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 M0R1B8 84 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 ABCD4O14678 606 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC2A10O95528 541 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 TXNDC12O95881 172 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 GASTP01350 101 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 IGKV3-15P01624 115 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 IGLV1-44P01699 117 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 CD3EP07766 207 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 NR2C1P13056 603 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 CD99P14209 185 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 PTAFRP25105 342 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 CD40P25942 277 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 SDHAP31040 664 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 UBE2NP61088 152 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 RAP1BP61224 184 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 RAP1AP62834 184 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 CD47Q08722 323 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 CCNIQ14094 377 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 RFX4Q33E94 735 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 C1orf146Q5VVC0 180 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 ADAM5Q6NVV9 412 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 SLC25A47Q6Q0C1 308 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 KLHL17Q6TDP4 642 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 TMEM108Q6UXF1 575 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 ZNF813Q6ZN06 617 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 TMEM179BQ7Z7N9 219 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 AQP11Q8NBQ7 271 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 RASD2Q96D21 266 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 C1QTNF6Q9BXI9 259 aa13.51□□□□□ -0.25
RABGGTA-219ENST00000560871 NOX3Q9HBY0 568 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms