RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 GPX7Q96SL4 187 aaPredicted RBP12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 GRIP2Q9C0E4 1043 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 EDARQ9UNE0 448 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 AMDHD2Q9Y303 409 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 ORC6Q9Y5N6 252 aa12.31□□□□□ -0.44
PKNOX1-209ENST00000560448 A6NIZ1 184 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 AHCYL1O43865 530 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 OR10H3O60404 316 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 LYZL6O75951 148 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 IGHV3-9P01782 118 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 ITGA5P08648 1049 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 EDNRAP25101 427 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 AQP2P41181 271 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 BIDP55957 195 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 RAP1BP61224 184 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 ISL1P61371 349 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 RAP1AP62834 184 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 TLE4Q04727 773 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 GABRA6Q16445 453 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 NRN1LQ496H8 165 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 FOXB2Q5VYV0 432 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 C8orf59Q8N0T1 100 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF786Q8N393 782 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 TSPAN14Q8NG11 270 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 OR10G2Q8NGC3 310 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 ALKBH3Q96Q83 286 aaPredicted RBP12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 GABARAPL3Q9BY60 117 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 MED29Q9NX70 200 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CDC42EP2O14613 210 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 KLF4O43474 513 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 UPK3AO75631 287 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CTAG2O75638 210 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CCNB2O95067 398 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 NDUFB2O95178 105 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CLPTM1O96005 669 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 WNT11O96014 354 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 APEHP13798 732 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ANXA8P13928 327 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 GSTM3P21266 225 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 GPR4P46093 362 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 RPS6KA3P51812 740 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ROR2Q01974 943 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 TSPAN31Q12999 210 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 KEAP1Q14145 624 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 SEC23BQ15437 767 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 GPR139Q6DWJ6 353 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 LAIR2Q6ISS4 152 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 KLHL24Q6TFL4 600 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF627Q7L945 461 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ATG16L2Q8NAA4 619 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 OR6N1Q8NGY5 312 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 GNPDA2Q8TDQ7 276 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 FAM46AQ96IP4 442 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 FEVQ99581 238 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 PITX2Q99697 317 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 ULBP2Q9BZM5 246 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 FAM192AQ9GZU8 254 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 KRT84Q9NSB2 600 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 NDRG4Q9ULP0 352 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-209ENST00000560448 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 RAD51DO75771 328 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 SERPINI2O75830 405 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 F13BP05160 661 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CD14P08571 375 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 PGA4P0DJD7 388 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 PGA3P0DJD8 388 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF133P52736 654 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TUBA4AP68366 448 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CD47Q08722 323 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 PPA1Q15181 289 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 TAB1Q15750 504 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ACKR1Q16570 336 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 HIST3H3Q16695 136 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 C3orf36Q3SXR2 165 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 DPY19L2P2Q6ZN68 376 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 ZER1Q7Z7L7 766 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 CLDN22Q8N7P3 220 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 FAM169BQ8N8A8 192 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 LRRC75AQ8NAA5 344 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 OR1K1Q8NGR3 316 aa12.28□□□□□ -0.44
PKNOX1-209ENST00000560448 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms