RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LRFN4Q6PJG9 635 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 HDXQ7Z353 690 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 NANOGNBQ7Z5D8 188 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 RFLNBQ8N5W9 214 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 GPR32P1Q8NGA4 272 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 OR10A6Q8NH74 314 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 C11orf40Q8WZ69 217 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 SYT3Q9BQG1 590 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 C19orf24Q9BVV8 132 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 PCDHAC1Q9H158 963 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 KCNN2Q9H2S1 579 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 ZNF385DQ9H6B1 395 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 CDH20Q9HBT6 801 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 TMEM38BQ9NVV0 291 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 STX18Q9P2W9 335 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 BAG5Q9UL15 447 aa11.71□□□□□ -0.53
SNRPA1-204ENST00000558020 IQCMA0A1B0GVH7 501 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 CENPBD1B2RD01 187 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 KPNA4O00629 521 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 TCF21O43680 179 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 NPPAP01160 153 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 MT-ND5P03915 603 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 QDPRP09417 244 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 TCN1P20061 433 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 ACHEP22303 614 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 DVL1P1P54792 670 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 CDH15P55291 814 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 NKPD1Q17RQ9 610 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 VMACQ2NL98 169 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 RGS7BPQ6MZT1 257 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 TMEM154Q6P9G4 183 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 UNQ6126/PRO20091Q6UXV3 157 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 LRRC17Q8N6Y2 441 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 SLC30A7Q8NEW0 376 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 THOC1Q96FV9 657 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 ECSITQ9BQ95 431 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF416Q9BWM5 594 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 POLR2J2Q9GZM3 115 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 POLR2J3Q9H1A7 115 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 SLCO1C1Q9NYB5 712 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF224Q9NZL3 707 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 SH3GLB1Q9Y371 365 aa11.7□□□□□ -0.54
SNRPA1-204ENST00000558020 A0A0G2JND7 137 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 MT-ND1P03886 318 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 IGFBP1P08833 259 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 ASAH2BP0C7U1 165 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 PATE4P0C8F1 98 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 PGA3P0DJD8 388 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 NR2C1P13056 603 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 ANPEPP15144 967 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 IFNA8P32881 189 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 RBM34P42696 430 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 ALDH3B1P43353 468 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 TAS2R41P59536 307 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 TBC1D28Q2M2D7 210 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 PCGF3Q3KNV8 242 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 TTMPQ5BVD1 217 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 CCDC80Q76M96 950 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 GLCCI1Q86VQ1 547 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 RETREG3Q86VR2 466 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 RBM45Q8IUH3 476 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 OR4K5Q8NGD3 323 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF519Q8TB69 540 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 SYNPRQ8TBG9 265 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 SNX33Q8WV41 574 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 TAMM41Q96BW9 452 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 SH3GL3Q99963 347 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 ZNF426Q9BUY5 554 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 BCL2L14Q9BZR8 327 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 NANOGQ9H9S0 305 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
SNRPA1-204ENST00000558020 HTR3EA5X5Y0 456 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 PPIHO43447 177 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 LYPD3O95274 346 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 SNAP29O95721 258 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 IGF2P01344 180 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 TFP02787 698 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 HPXP02790 462 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 LCKP06239 509 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 NAT2P11245 290 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 FUT1P19526 365 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 DRD4P21917 467 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 COL8A2P25067 703 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 IL2RGP31785 369 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 GUCA1AP43080 201 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 SEC24CP53992 1094 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 UCP2P55851 309 aa11.68□□□□□ -0.54
SNRPA1-204ENST00000558020 TEKQ02763 1124 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms