RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 GLYATQ6IB77 296 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 C3orf33Q6P1S2 294 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ERICH5Q6P6B1 374 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 TTC33Q6PID6 262 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CLEC9AQ6UXN8 241 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 DEF8Q6ZN54 512 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 TMPPEQ6ZT21 453 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 HIST3H2AQ7L7L0 130 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 RRM2BQ7LG56 351 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CARM1Q86X55 608 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 PTOV1Q86YD1 416 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 RBM45Q8IUH3 476 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 MICU2Q8IYU8 434 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 KDM8Q8N371 416 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM99Q8N816 258 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 RELL2Q8NC24 303 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ABHD3Q8WU67 409 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 LZICQ8WZA0 190 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 HIST1H2ACQ93077 130 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CPNE4Q96A23 557 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 SLC47A1Q96FL8 570 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ARL5BQ96KC2 179 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF583Q96ND8 569 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ZFP3Q96NJ6 502 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF300Q96RE9 604 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CDRT15Q96T59 188 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 MED18Q9BUE0 208 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 SFXN3Q9BWM7 321 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 MYLK2Q9H1R3 596 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 PIGMQ9H3S5 423 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 TMEM38AQ9H6F2 299 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 KAT8Q9H7Z6 458 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 EXOSC3Q9NQT5 275 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CMTM6Q9NX76 183 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 CLCF1Q9UBD9 225 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 UPB1Q9UBR1 384 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 NKX1-2Q9UD57 310 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 TAGLN3Q9UI15 199 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 BAG5Q9UL15 447 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF175Q9Y473 711 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 V9GYQ6 96 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-237ENST00000556274 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 LRRK2Q5S007 2527 aa4.12□□□□□ -1.75
ATXN3-237ENST00000556274 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 AKAP6Q13023 2319 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 A0A1B0GWA3 101 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 A8MXE2 369 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 C11orf98E9PRG8 122 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 MRPL33O75394 65 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 STAMBPO95630 424 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 LGI1O95970 557 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CH25HO95992 272 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ADAP00813 363 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 SERPINA1P01009 418 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CRHP06850 196 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 PNMTP11086 282 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 HOXB9P17482 250 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 RPS4Y1P22090 263 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 IL32P24001 234 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 FKBP2P26885 142 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ELK4P28324 431 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 KDELR2P33947 212 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CD79BP40259 229 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CLK1P49759 484 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 MNAT1P51948 309 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CDH12P55289 794 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 PMS2P3Q13401 168 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 STK11Q15831 433 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ZNF239Q16600 458 aaKnown RBP4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 SLC25A53Q5H9E4 307 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 COQ5Q5HYK3 327 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CARD17Q5XLA6 110 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ULK3Q6PHR2 472 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 DHRS4L2Q6PKH6 230 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 C16orf89Q6UX73 402 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 CASP12Q6UXS9 341 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 GALNT5Q7Z7M9 940 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 DEFB107AQ8IZN7 70 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 OR2C3Q8N628 320 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 OR8J3Q8NGG0 315 aa4.11□□□□□ -1.75
ATXN3-237ENST00000556274 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms