RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 XKRYO14609 159 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 KRT33AO76009 404 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 HMGN1P05114 100 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 ITGA5P08648 1049 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 QDPRP09417 244 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 HIST1H1CP16403 213 aaKnown RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 IGFBP2P18065 325 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 EPHA2P29317 976 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 NOS3P29474 1203 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 GRK5P34947 590 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 UGT2B10P36537 528 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 POLR2IP36954 125 aaKnown RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 PEX19P40855 299 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 RAD23AP54725 363 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 FOXG1P55316 489 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 CLRN1P58418 232 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 EFNB1P98172 346 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 SORDQ00796 357 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 ROR2Q01974 943 aaKnown RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 LGALS3BPQ08380 585 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 NPRL3Q12980 569 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 TOP3AQ13472 1001 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 KRR1Q13601 381 aaKnown RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 TRIP10Q15642 601 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 C10orf128Q5T292 105 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 C1QTNF12Q5T7M4 302 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 CARD17Q5XLA6 110 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 NPEPL1Q8NDH3 523 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 C1orf162Q8NEQ5 155 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 RASD2Q96D21 266 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
SYNE2-219ENST00000555323 RDH12Q96NR8 316 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 CRLF2Q9HC73 371 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 B3GAT2Q9NPZ5 323 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 CMC2Q9NRP2 79 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 DLGAP1O14490 977 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 DHHO43323 396 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 CDH2P19022 906 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 POU1F1P28069 291 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 PEX2P28328 305 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 SH3BGRP55822 239 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 TGFBR3Q03167 851 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 GABRA6Q16445 453 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 CEACAM16Q2WEN9 425 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 NRN1LQ496H8 165 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 SLC35F1Q5T1Q4 408 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 SLX4IPQ5VYV7 408 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 OR7E24Q6IFN5 339 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 CXorf67Q86X51 503 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 SYT14Q8NB59 555 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 OR52E2Q8NGJ4 325 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 OR4K13Q8NH42 304 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 PSMG3-AS1Q96PY0 264 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 ALKBH3Q96Q83 286 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 ULBP2Q9BZM5 246 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 GRIP2Q9C0E4 1043 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 NPDC1Q9NQX5 325 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-219ENST00000555323 KLHL21Q9UJP4 597 aa11.15□□□□□ -0.62
SYNE2-219ENST00000555323 IGKV1D-43A0A0B4J1Z2 117 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 ZNF99A8MXY4 864 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-219ENST00000555323 SURF4O15260 269 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 PPP3CBP16298 524 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNE2-219ENST00000555323 LRRC36Q1X8D7 754 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 TMEM236Q5W0B7 351 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 FOXL2NBQ6ZUU3 175 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 ZBTB46Q86UZ6 589 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 P2RY8Q86VZ1 359 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 C17orf78Q8N4C9 275 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 IQCF1Q8N6M8 205 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 SLC37A3Q8NCC5 494 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 STEAP2Q8NFT2 490 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 NRG4Q8WWG1 115 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 BCL2L2Q92843 193 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-219ENST00000555323 KISS1RQ969F8 398 aaPredicted RBP11.14□□□□□ -0.63
SYNE2-219ENST00000555323 HRASLS5Q96KN8 279 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 TEX12Q9BXU0 123 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 NMNAT2Q9BZQ4 307 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 SYT4Q9H2B2 425 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 ORC6Q9Y5N6 252 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 FKBP7Q9Y680 259 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 MYO18BQ8IUG5 2567 aa11.14□□□□□ -0.63
SYNE2-219ENST00000555323 DOPEY1Q5JWR5 2465 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SLC16A6O15403 523 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 LYZL6O75951 148 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SLC2A10O95528 541 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 CLDN1O95832 211 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 RENP00797 406 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 IFNGP01579 166 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 CTLA4P16410 223 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms