RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 RBP7Q96R05 134 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 CNN2Q99439 309 aaKnown RBP9.7□□□□□ -0.86
PABPN1-203ENST00000553960 HES7Q9BYE0 225 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 LINC00470Q9BZP3 86 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 KLHL1Q9NR64 748 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 ENPP5Q9UJA9 477 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 NPIPA1Q9UND3 350 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 COMMD3-BMI1R4GMX3 469 aa9.7□□□□□ -0.86
PABPN1-203ENST00000553960 TRGV5A0A0B4J1U4 118 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ZNF814B7Z6K7 855 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 G3V3Y1 287 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 RPL36A-HNRNPH2H7BZ11 118 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 DCTN6O00399 190 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SLC22A1O15245 554 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 GMFGO60234 142 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 KHDRBS3O75525 346 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 INMTO95050 263 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 CNOT4O95628 575 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 CRYABP02511 175 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 HOXD4P09016 255 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 FCGR2AP12318 317 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 HLA-DOBP13765 273 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ALOX5APP20292 161 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PTNP21246 168 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 AHCYP23526 432 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PSMA1P25786 263 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 FGF9P31371 208 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SFTPDP35247 375 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PTGER4P35408 488 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 TGFBR2P37173 567 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 CD97P48960 835 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ETV1P50549 477 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 LSM6P62312 80 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 POU3F1Q03052 451 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 C19orf57Q0VDD7 668 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SF3B4Q15427 424 aaKnown RBP eCLIP9.69□□□□□ -0.863e-12■■■■□ 21.8
PABPN1-203ENST00000553960 TRAM1Q15629 374 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 TIGD6Q17RP2 521 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 KRTCAP3Q53RY4 240 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ZNF324BQ6AW86 544 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SLC25A47Q6Q0C1 308 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ZNF322Q6U7Q0 402 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PLEKHG7Q6ZR37 379 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SLC16A12Q6ZSM3 486 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 IGFN1Q86VF2 1251 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ATCAYQ86WG3 371 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 KLHL36Q8N4N3 616 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 CYB561A3Q8NBI2 242 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 NOXO1Q8NFA2 376 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 OTOSQ8NHW6 89 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PHYHIPQ92561 330 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ITFG2Q969R8 447 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PNPLA2Q96AD5 504 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 SYT4Q9H2B2 425 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 WDR76Q9H967 626 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 PARPBPQ9NWS1 579 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 NDUFB11Q9NX14 153 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 BABAM2Q9NXR7 383 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 RSL24D1Q9UHA3 163 aaKnown RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 ING1Q9UK53 422 aaPredicted RBP9.69□□□□□ -0.86
PABPN1-203ENST00000553960 B3GNT3Q9Y2A9 372 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 FLVCR1Q9Y5Y0 555 aa9.69□□□□□ -0.86
PABPN1-203ENST00000553960 NCOA6Q14686 2063 aaPredicted RBP9.68□□□□□ -0.86
PABPN1-203ENST00000553960 A6NL46 340 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 C12orf71A8MTZ7 269 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 C11orf98E9PRG8 122 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 H3BSA7 217 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 CCRL2O00421 344 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 MYL12BO14950 172 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 OGG1O15527 345 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 ARHGEF9O43307 516 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 PLPP2O43688 288 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 ZNF254O75437 659 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 TRAPPC6AO75865 159 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 TFP02787 698 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 MT-ND5P03915 603 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 LCKP06239 509 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 CTLA4P16410 223 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 ZNF24P17028 368 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 PLGLB1Q02325 96 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 PIGFQ07326 219 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 NEDD8Q15843 81 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 CTF1Q16619 201 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 GXYLT1Q4G148 440 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 LRRC69Q6ZNQ3 347 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 GLB1L2Q8IW92 636 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 C20orf196Q8IYI0 205 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 RBMXL3Q8N7X1 1067 aaKnown RBP9.68□□□□□ -0.86
PABPN1-203ENST00000553960 OR4F15Q8NGB8 312 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 TMIGD2Q96BF3 282 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 ISOC1Q96CN7 298 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 OPALINQ96PE5 141 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 OR2M2Q96R28 347 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 FUNDC2Q9BWH2 189 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 SRXN1Q9BYN0 137 aa9.68□□□□□ -0.86
PABPN1-203ENST00000553960 CCDC90BQ9GZT6 254 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms