RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PLGRKTQ9HBL7 147 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 KCNG2Q9UJ96 466 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 CACNA1CQ13936 2221 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 ZNF829Q3KNS6 432 aaPredicted RBP17.61■□□□□ 0.41
SSH1-209ENST00000551165 SNX29P2Q8IUI4 249 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 SYS1Q8N2H4 156 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 GHSRQ92847 366 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 INTS14Q96SY0 518 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 MMP27Q9H306 513 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 FANCFQ9NPI8 374 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 DLL3Q9NYJ7 618 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 HDGFL3Q9Y3E1 203 aa17.61■□□□□ 0.41
SSH1-209ENST00000551165 ARGFXA6NJG6 315 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 CTDSP2O14595 271 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 NKX2-8O15522 239 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 HLA-DPB1P04440 258 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 PRKAR1AP10644 381 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 DAP3P51398 398 aaKnown RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 CLDN20P56880 219 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 ACTA2P62736 377 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 ACTG2P63267 376 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 WIPI1Q5MNZ9 446 aaPredicted RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 TMEM225Q6GV28 225 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 OR14L1PQ8NHC6 308 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 UCN2Q96RP3 112 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 KLHL13Q9P2N7 655 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 MRM2Q9UI43 246 aaKnown RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 TEKT2Q9UIF3 430 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 FAM186AA6NE01 2351 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 A0A0J9YW62 118 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 TRAF3IP2O43734 574 aaPredicted RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 NANOS3P60323 173 aaKnown RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 GPR50Q13585 617 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 FAM83FQ8NEG4 500 aaPredicted RBP17.6■□□□□ 0.41
SSH1-209ENST00000551165 SNX18Q96RF0 628 aa17.6■□□□□ 0.41
SSH1-209ENST00000551165 DCHS1Q96JQ0 3298 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 AKAP13Q12802 2813 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 A0A1B0GTH9 108 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 ZNF593O00488 134 aaPredicted RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 TNFSF11O14788 317 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 TRAPPC6AO75865 159 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 NCR1O76036 304 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 RPP14O95059 124 aaKnown RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 CEACAM1P13688 526 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 ALOX5APP20292 161 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 CNR1P21554 472 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 SRD5A2P31213 254 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 STARP49675 285 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 SIRPAP78324 504 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 CAMK2DQ13557 499 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 OR1C1Q15619 314 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 THEM6Q8WUY1 208 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 KIAA1143Q96AT1 154 aaPredicted RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 PDCD1LG2Q9BQ51 273 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 UTP23Q9BRU9 249 aaKnown RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 CLDN25C9JDP6 229 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 OGG1O15527 345 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 WNT11O96014 354 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 GBX2P52951 348 aaPredicted RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 HNRNPA0Q13151 305 aaKnown RBP17.59■□□□□ 0.41
SSH1-209ENST00000551165 CDK5R1Q15078 307 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 INAQ16352 499 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 UEVLDQ8IX04 471 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 ABHD4Q8TB40 342 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 SLC25A46Q96AG3 418 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 LAMP5Q9UJQ1 280 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 TRAPPC4Q9Y296 219 aa17.59■□□□□ 0.41
SSH1-209ENST00000551165 PTPRZ1P23471 2315 aaPredicted RBP17.58■□□□□ 0.41
SSH1-209ENST00000551165 LAMA5O15230 3695 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 A6NIZ1 184 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 AQP7P3A6NL99 342 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 RGS9O75916 674 aaPredicted RBP17.58■□□□□ 0.41
SSH1-209ENST00000551165 CD82P27701 267 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 SOX6P35712 828 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 CD97P48960 835 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 RAP1BP61224 184 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 RAP1AP62834 184 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 H3F3AP84243 136 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 CARD17Q5XLA6 110 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 NEIL3Q8TAT5 605 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 NSMAFQ92636 917 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 FER1L6-AS2Q96M78 137 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 KLHL15Q96M94 604 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 PIGQQ9BRB3 760 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 FAM117AQ9C073 453 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 GSTK1Q9Y2Q3 226 aa17.58■□□□□ 0.41
SSH1-209ENST00000551165 NPIPB13A6NJU9 1138 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 NPIPB4C9JG80 1138 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 IL1AP01583 271 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 ZNF17P17021 662 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 EDNRAP25101 427 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 GDF1P27539 372 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 GDI2P50395 445 aaKnown RBP17.58■□□□□ 0.4
SSH1-209ENST00000551165 TAS2R43P59537 309 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 GALNT16Q8N428 558 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 IP6K3Q96PC2 410 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 MRPL13Q9BYD1 178 aaKnown RBP17.58■□□□□ 0.4
SSH1-209ENST00000551165 SRXN1Q9BYN0 137 aa17.58■□□□□ 0.4
SSH1-209ENST00000551165 ZFP64Q9NPA5 681 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms