RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CUTCQ9NTM9 273 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 CGGBP1Q9UFW8 167 aaPredicted RBP11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 OR52A1Q9UKL2 312 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 TMED7Q9Y3B3 224 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 TRAV1-2A0A0B4J238 106 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 P04436 131 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 ACY1Q03154 408 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 CLLU1Q5K131 121 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 FAAP20Q6NZ36 180 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 SHISA6Q6ZSJ9 500 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 GABRG1Q8N1C3 465 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 NXPE3Q969Y0 559 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 B4GALT7Q9UBV7 327 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 MICAL3Q7RTP6 2002 aa11.22□□□□□ -0.61
NPC1L1-204ENST00000546276 PMP2P02689 132 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 HOXB9P17482 250 aaPredicted RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 OR1D4P47884 311 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 FASLGP48023 281 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 CDK5Q00535 292 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SNTB1Q13884 538 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 LINC00346Q8IVM7 164 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SIRT6Q8N6T7 355 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 OR14A16Q8NHC5 309 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 FGGYQ96C11 551 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 MALSU1Q96EH3 234 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 CRB3Q9BUF7 120 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 MBNL1Q9NR56 388 aaKnown RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 WIF1Q9Y5W5 379 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SCN9AQ15858 1988 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 FTCDNL1E5RQL4 147 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 YY2O15391 372 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 RGS11O94810 467 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 OPN1LWP04000 364 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 RFX2P48378 723 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 EFNA3P52797 238 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 MELKQ14680 651 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF77Q15935 545 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC36A2Q495M3 483 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC22A25Q6T423 547 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 RSPRY1Q96DX4 576 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ST6GAL2Q96JF0 529 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC46A1Q96NT5 459 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 TAS2R5Q9NYW4 299 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SRPK3Q9UPE1 567 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 PUS1Q9Y606 427 aaKnown RBP eCLIP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 IGLV3-16A0A075B6K0 115 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 FITM1A5D6W6 292 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 TSTD3H0UI37 97 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 TIAL1Q01085 375 aaKnown RBP eCLIP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 DEFB133Q30KQ1 61 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 OR14L1PQ8NHC6 308 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ST7LQ8TDW4 575 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 BCL7CQ8WUZ0 217 aaPredicted RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 HAS2Q92819 552 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SGCZQ96LD1 299 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF286AQ9HBT8 521 aa11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
NPC1L1-204ENST00000546276 SCN1AP35498 2009 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 E9PI62 339 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 RGS13O14921 159 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 CA3P07451 260 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 UBE2KP61086 200 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 TMEM201Q5SNT2 666 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 FBXW12Q6X9E4 464 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 OR2AK2Q8NG84 335 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 CNRIP1Q96F85 164 aaPredicted RBP11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 TCEAL2Q9H3H9 227 aaPredicted RBP11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 ERVMER34-1Q9H9K5 563 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 SPHK1Q9NYA1 384 aa11.21□□□□□ -0.62
NPC1L1-204ENST00000546276 CD300LBA8K4G0 201 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 GPR137BO60478 399 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 UBE2MP61081 183 aaKnown RBP11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 C17orf107Q6ZR85 190 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 ARL5BQ96KC2 179 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 CCNL2Q96S94 520 aaPredicted RBP11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 PRAMEF27A3QJZ7 478 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 RAB19A4D1S5 217 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 BRINP1O60477 761 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 RAC2P15153 192 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 ATP1B3P54709 279 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 RIN1Q13671 783 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 PRAMEF9Q5VWM5 478 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 OR10K2Q6IF99 312 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 TMPPEQ6ZT21 453 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 RHOUQ7L0Q8 258 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 EXO1Q9UQ84 846 aaKnown RBP11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 TRBV5-3A0A0A0MS03 114 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 A6NLC8 198 aa11.2□□□□□ -0.62
NPC1L1-204ENST00000546276 H3BQ06 376 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms