RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 WDR88Q6ZMY6 472 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 PHC2Q8IXK0 858 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 LINC01356Q8N9X3 169 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 OR8J3Q8NGG0 315 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 ECSITQ9BQ95 431 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MRPL37Q9BZE1 423 aaKnown RBP11.31□□□□□ -0.6
RTN3-212ENST00000543123 TMEM38BQ9NVV0 291 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 A0A1W2PPW3 197 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 DHHO43323 396 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 LYPD3O95274 346 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 IGF2P01344 180 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 PGA3P0DJD8 388 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 IFNA8P32881 189 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 TAS2R41P59536 307 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 PLP2Q04941 152 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 RIN1Q13671 783 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 RAB39AQ14964 217 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 RBM45Q8IUH3 476 aaKnown RBP11.3□□□□□ -0.6
RTN3-212ENST00000543123 ZCCHC24Q8N2G6 241 aaKnown RBP11.3□□□□□ -0.6
RTN3-212ENST00000543123 ARIH2OSQ8N7S6 290 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 SLC30A7Q8NEW0 376 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 OR1J2Q8NGS2 313 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 LRMDAQ9H2I8 198 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 CDH20Q9HBT6 801 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 ZNF224Q9NZL3 707 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 SH3GLB1Q9Y371 365 aa11.3□□□□□ -0.6
RTN3-212ENST00000543123 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 LRP5LA4QPB2 252 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 GMNCA6NCL1 334 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 BLOC1S5-TXNDC5H3BN57 136 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 OR5F1O95221 314 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 MT-ND1P03886 318 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 MT-ND5P03915 603 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 THY1P04216 161 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 QDPRP09417 244 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 THRBP10828 461 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 ACHEP22303 614 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
RTN3-212ENST00000543123 MELKQ14680 651 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 FXNQ16595 210 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 NKPD1Q17RQ9 610 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 TBC1D28Q2M2D7 210 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
RTN3-212ENST00000543123 NANOGP8Q6NSW7 305 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 SLC16A14Q7RTX9 510 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 CARM1Q86X55 608 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 SKA3Q8IX90 412 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 LRRC17Q8N6Y2 441 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 OR4D11Q8NGI4 311 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 RDH5Q92781 318 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 ZNF416Q9BWM5 594 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 TMEM120AQ9BXJ8 343 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 KCNN2Q9H2S1 579 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 RNF121Q9H920 327 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 NANOGQ9H9S0 305 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 DUSP13Q9UII6 198 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 ANK2Q01484 3957 aa11.29□□□□□ -0.6
RTN3-212ENST00000543123 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 NPIPB13A6NJU9 1138 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 NPIPB4C9JG80 1138 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 MRASO14807 208 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 LILRA1O75019 489 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 OR7A10O76100 309 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 SNAP29O95721 258 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 RAD52P43351 418 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
RTN3-212ENST00000543123 CDH15P55291 814 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 KLF3P57682 345 aaPredicted RBP11.28□□□□□ -0.6
RTN3-212ENST00000543123 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 MOGQ16653 247 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 PCGF3Q3KNV8 242 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 LIPNQ5VXI9 398 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 DEF8Q6ZN54 512 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 TMEM239Q8WW34 195 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 SGTBQ96EQ0 304 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 SMURF2Q9HAU4 748 aa11.28□□□□□ -0.6
RTN3-212ENST00000543123 MEPEQ9NQ76 525 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms