RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TSPAN32Q96QS1 320 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 GPA33Q99795 319 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 BTBD10Q9BSF8 475 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 ZNF224Q9NZL3 707 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 ZNF346Q9UL40 294 aaKnown RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 ITPR3Q14573 2671 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 QDPRP09417 244 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 HMGA2P52926 109 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 PGGHGQ32M88 737 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 C10orf128Q5T292 105 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 FAM205BPQ63HN1 556 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 SLC22A25Q6T423 547 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 B3GLCTQ6Y288 498 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 LRRC75A-AS1Q8N1F1 130 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 KATNB1Q9BVA0 655 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 SMURF2Q9HAU4 748 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 TMEM38BQ9NVV0 291 aa17.81■□□□□ 0.44
CCS-208ENST00000533244 CISD1Q9NZ45 108 aaKnown RBP17.81■□□□□ 0.44
CCS-208ENST00000533244 MAP1AP78559 2803 aaPredicted RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 HEATR1Q9H583 2144 aaKnown RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 E7EQL1 145 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 F8P00451 2351 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 CECR9P0C854 216 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 PAX1P15863 534 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 FXYD6P3P58550 94 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 TOP3AQ13472 1001 aaPredicted RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 NRN1LQ496H8 165 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 ZER1Q7Z7L7 766 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 MDP1Q86V88 176 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 LURAP1LQ8IV03 231 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 SYT14Q8NB59 555 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 SMAP2Q8WU79 429 aaPredicted RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 RSRC1Q96IZ7 334 aaKnown RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 ZNF75AQ96N20 296 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 GPX7Q96SL4 187 aaPredicted RBP17.8■□□□□ 0.44
CCS-208ENST00000533244 ALG12Q9BV10 488 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 NOX3Q9HBY0 568 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 LYVE1Q9Y5Y7 322 aa17.8■□□□□ 0.44
CCS-208ENST00000533244 KRT36O76013 467 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 HLA-HP01893 362 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 SOD3P08294 240 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 CD14P08571 375 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 ARR3P36575 388 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 MYBPC1Q00872 1141 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 FAM122BQ7Z309 247 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 DTX2Q86UW9 622 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 MYPOPQ86VE0 399 aaPredicted RBP17.79■□□□□ 0.44
CCS-208ENST00000533244 KRTAP1-3Q8IUG1 177 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 ARIH2OSQ8N7S6 290 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 TMEM171Q8WVE6 324 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 GRIP2Q9C0E4 1043 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 SEC61A2Q9H9S3 476 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 AURKCQ9UQB9 309 aa17.79■□□□□ 0.44
CCS-208ENST00000533244 ARID1AO14497 2285 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 A6NIZ1 184 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 AQP12BA6NM10 295 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 ATP6V1G2-DDX39BF2Z307 99 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 OVOL3O00110 214 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 SMPD2O60906 423 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 DNAJC8O75937 253 aaPredicted RBP17.78■□□□□ 0.44
CCS-208ENST00000533244 NDUFB2O95178 105 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 NR2C1P13056 603 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 FPR3P25089 353 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 ACVR1BP36896 505 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 RAP1BP61224 184 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 RAP1AP62834 184 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 NAAAQ02083 359 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 FAM98BQ52LJ0 330 aaKnown RBP17.78■□□□□ 0.44
CCS-208ENST00000533244 THSD4Q6ZMP0 1018 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 AQP12AQ8IXF9 295 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 DEPDC4Q8N2C3 294 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 SLC22A24Q8N4F4 322 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 OR4C15Q8NGM1 316 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 FNDC8Q8TC99 324 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 NANOS1Q8WY41 292 aaKnown RBP17.78■□□□□ 0.44
CCS-208ENST00000533244 LRGUKQ96M69 825 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 DHRS9Q9BPW9 319 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 GSX2Q9BZM3 304 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 TRIM15Q9C019 465 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 NDEL1Q9GZM8 345 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 DENND2DQ9H6A0 471 aaPredicted RBP17.78■□□□□ 0.44
CCS-208ENST00000533244 NRIP3Q9NQ35 241 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 ZNF701Q9NV72 531 aaPredicted RBP17.78■□□□□ 0.44
CCS-208ENST00000533244 MOKQ9UQ07 419 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 LAMP3Q9UQV4 416 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 ADAM18Q9Y3Q7 739 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 UGT2A1Q9Y4X1 527 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 VPS13CQ709C8 3753 aa17.78■□□□□ 0.44
CCS-208ENST00000533244 IGKV1D-43A0A0B4J1Z2 117 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 UNC119BA6NIH7 251 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 ENTPD5O75356 428 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 SLC2A10O95528 541 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 CD8AP01732 235 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 CELA3BP08861 270 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 OR8G3PP0DMU2 310 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 GSSP48637 474 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 ERVK-25P63136 954 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 CHRNB3Q05901 458 aa17.77■□□□□ 0.44
CCS-208ENST00000533244 FMODQ06828 376 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms