RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 LMF1Q96S06 567 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 NMNAT3Q96T66 252 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TBX5Q99593 518 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CTRCQ99895 268 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 COMMD4Q9H0A8 199 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 IRF2BPLQ9H1B7 796 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RPRD1BQ9NQG5 326 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 SLC22A11Q9NSA0 550 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 RBFOX1Q9NWB1 397 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 VSX1Q9NZR4 365 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 COMMD3Q9UBI1 195 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 CTSFQ9UBX1 484 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 MUTYHQ9UIF7 546 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 GNG8Q9UK08 70 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 FBXO4Q9UKT5 387 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 PAIP2BQ9ULR5 123 aaKnown RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 SPATA2Q9UM82 520 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 B3GALT5Q9Y2C3 310 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 TMED7Q9Y3B3 224 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 ETV7Q9Y603 341 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 SIRT4Q9Y6E7 314 aaPredicted RBP5.02□□□□□ -1.61
PCF11-205ENST00000530906 U3KQA8 63 aa5.02□□□□□ -1.61
PCF11-205ENST00000530906 UNC13CQ8NB66 2214 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SEC16AO15027 2179 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 A0A087WZY1 265 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 LOC102723996A0A087X1L8 192 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 A0A0G2JK05 382 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 TRBV5-5A0A0J9YX44 114 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ZC3H12DA2A288 527 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 CPED1A4D0V7 1026 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 PRSS37A4D1T9 235 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 OR2W5A6NFC9 320 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 CENPXA8MT69 81 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 A8MU76 341 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 FAM25AB3EWG3 89 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 FAM25CB3EWG5 89 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 FAM25GB3EWG6 89 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 C9J4A7 227 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 FAM47E-STBD1D6RA91 191 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 D6RAR5 112 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 FTCDNL1E5RQL4 147 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 E9PI62 339 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 BOLA2-SMG1P6H3BVE0 249 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 AIPO00170 330 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 TP53I11O14683 189 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 LYRM1O43325 122 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SIGLEC6O43699 453 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SULT1B1O43704 296 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 GSTZ1O43708 216 aaPredicted RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 ORC5O43913 435 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 HPGDSO60760 199 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SLC43A1O75387 559 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ZNF254O75437 659 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 LDOC1O95751 146 aaPredicted RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 HRGP04196 525 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 GYPBP06028 91 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 KLK3P07288 261 aaPredicted RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 DCNP07585 359 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 CALCBP10092 127 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 CLUP10909 449 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 IMPDH2P12268 514 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 PRKCAP17252 672 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ALOX5APP20292 161 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 PTNP21246 168 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 HLA-DMAP28067 261 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SHC1P29353 583 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 CCKBRP32239 447 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 THBS2P35442 1172 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 MNDAP41218 407 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 NAA10P41227 235 aaPredicted RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 EIF1P41567 113 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 CASP3P42574 277 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 EIF2B2P49770 351 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 MMP15P51511 669 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ZNF41P51814 821 aaPredicted RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 RAG2P55895 527 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 AP3S2P59780 193 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 GPR85P60893 370 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 RPS11P62280 158 aaKnown RBP eCLIP5.01□□□□□ -1.61
PCF11-205ENST00000530906 BTG1P62324 171 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ZXDAP98168 799 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 E2F1Q01094 437 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ROM1Q03395 351 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 GLO1Q04760 184 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SIGLEC14Q08ET2 396 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 SRSF5Q13243 272 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 ALKBH1Q13686 389 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 IL18Q14116 193 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 ZNF239Q16600 458 aaKnown RBP5.01□□□□□ -1.61
PCF11-205ENST00000530906 BAK1Q16611 211 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 COL28A1Q2UY09 1125 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 Q499Y3 187 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 MESTQ5EB52 335 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 TEX30Q5JUR7 227 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 UBE2NLQ5JXB2 153 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 IDNKQ5T6J7 187 aa5.01□□□□□ -1.61
PCF11-205ENST00000530906 C1orf189Q5VU69 101 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms